Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02473 ATGAAGTTTCATGACACATTCAATCTTGAACTTGAGCACATTGTCATAGAAAATCTGAACCAAGAAATGGAACACACCATGCAACCTGCCATTGGATCTGTTGTGCCTCGTGGTGCCTTTGCAGTCTTGCTCCTGCTGCTGTTTTTATTCTCCTCATTCACTTCTACTGAAGCCTATGATCCGCTTGATCCAACTGGCAATATAACAATCAAATGGGATGTCATTACCTGGACTCCAGATGGTTATGTTGCTGTTGTTACAATGTACAACTTTCAACAATATCGCCACATTCAGGCCCCTGGATGGTCATTAGGGTGGACATGGGCTAAAAAGGAAGTAATTTGGAACATGATGGGAAGCCAAACAACAGAGCAAGGGGACTGTTCAAAGTTCAAAGCAGGTATTCCTCATTGTTGTAAGAAGGACCCAACAGTTGTGGATTTACTGCCAGGGACTCCTTACAACCAACAGATTGCAAATTGTTGCAAAGGGGGTGTCCTAAATTCATGGGGTCAGGACCCCAGCAGTGCAGTCAGTTCTTTCCAGATTAGTGTTGGTTCTGCTGGAACAACAAACAAAACGGTCAAAATGCCTAAAAATTTTACCCTCAAGGCACCAGGACCTGGCTACACTTGTGGTCCTGCAAAGGTTGTGAAACCAACTACATTTATTACGAATGACAAGAGGAGAATCACCCAAGCCATGATGACTTGGAATATTACCTGCACTTATTCTCAATTCCTGGCTCAAAAGACACCAAGTTGTTGTGTTTCTCTCTCATCCTTCTATAATAACACAGTAGTAAACTGCCCAACCTGCACCTGTGGCTGCCAAAACAAAACAGAACCTGGCAGCTGTGTAGATCCGAATTCACCACATTTAGGTTCAGTTGTATCATCATCAAGCAAAGGTGCAAACACACCTCTAGTTCAGTGTACCAGCCACATGTGTCCGGTTAGAGTGCATTGGCACGTGAAGCTCAATTACAAAGAGTACTGGAGGGTCAAGATCACAATCACTAATTTCAATTACAGAATGAACTACTCACAGTGGAACCTTGTTGTGCAGCATCCCAATTTAGATAATATTACCCAGCTCTTCAGTTTCCAGTACAAGTCACTGACACCCTATGAGGGCTTGAATGATACAAGTATGCTATGGGGAGTCAAGTTCTACAATGATTTTCTTTCTTCAGCTGGACCTCTTGGTAACGTTCAATCAGAAATCTTACTTAGAAAAGACAAATCAACCTTCACATTTGATAAGGGATGGGCATTCCCCAGAAGGATTTATTTCAATGGGGATAACTGTGTTATGCCTCCTCCAGATGCCTACCCTTGGCTTCCAAATGCTAGTTCTAAACTAGTTTTCTCTTTACTAAGTACAGTCATAGCCACTTTAGCTTCTTTGTTAAATCTTATTTAA 1425 0.4218 MKFHDTFNLELEHIVIENLNQEMEHTMQPAIGSVVPRGAFAVLLLLLFLFSSFTSTEAYDPLDPTGNITIKWDVITWTPDGYVAVVTMYNFQQYRHIQAPGWSLGWTWAKKEVIWNMMGSQTTEQGDCSKFKAGIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWGQDPSSAVSSFQISVGSAGTTNKTVKMPKNFTLKAPGPGYTCGPAKVVKPTTFITNDKRRITQAMMTWNITCTYSQFLAQKTPSCCVSLSSFYNNTVVNCPTCTCGCQNKTEPGSCVDPNSPHLGSVVSSSSKGANTPLVQCTSHMCPVRVHWHVKLNYKEYWRVKITITNFNYRMNYSQWNLVVQHPNLDNITQLFSFQYKSLTPYEGLNDTSMLWGVKFYNDFLSSAGPLGNVQSEILLRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSKLVFSLLSTVIATLASLLNLI 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02473 474 PANTHER PROTEIN COBRA 46 464 IPR006918 GO:0010215|GO:0016020
Spst9g02473 474 PIRSF COBRA 33 474 IPR006918 GO:0010215|GO:0016020
Spst9g02473 474 Pfam COBRA-like protein 82 245 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02473 Spst-Chr9 58368507 58371665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02473 40 472 COBRA Gene Family AT3G02210 73.333 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02473 - - gmx:100815779 887.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02473 9 58368507 58371665 Spst9g02473 9 58368507 58371665 ECH