Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02470 ATGATTCAAATAGAAAGAGGAATCCGACATTGGAAGCACTTTGGTGTTATTTTGTTGCTGAGTTCTGTACCTCCGGTGCTGCCACCTCCACCACAACCACCACCACCACCACCGCAGTATCAGCAGGCTCCGCCACATTTCCATCAGTTCCCACCACCTAATGTTGGTGGTCCTCCTCCACCACCACCTAACATTGGCGGGCCACCACCACCACCACCACCTCATCATGTTTATTTAAATGGACCTCCTCCTCCACCACCTCCTAATTCGTCATCGTCAGTTCCGTTGAACCTTCCGGTTCAAGGTTCACTTAATGTGATGCCAAATACAGGACAATCATATGCTATACCTTCTCAATTACACCATGGGAGCAGCATGGCGCCACAAGCATCTTGGGCTCCAGGGCCACAAACTAGAGTATTGCCACCACCACCACCACCCCCTCCTCCCTCGGCTTCCCAAGGTCAAATTTTGTATAACCCTCCTTTCCATCGTCCACCTCTGCAGCCCGGTGATGTTCAGAATCTGCATAATGCTCCTCCACCACCACCCCCTTCATCAATTTATTTCCATTCAACTGTTGGGAATTACCAAGTGCCTCCCGGTATTCCCCCACCGTTGCCTTCGTCTCCACCACCTGCTCTTCCGGCTCCACCGCCTCCTCCTCTTACTGCTCCGGTAACCTCCTTCTCATCAAATGCTGCAGGCACTGGCCCTCATACTGCTAAGTTCTCTGGCTTAGAATCAAAGACTGTGAATTCGGTTGACGAATCTGGTATTGTTCCTGTAAATGGTTCTGATTCTAAATTGGATGGTCCAAGTTGTAGAGACGTTGCTAGTGCTGAAAAAGATGACAATCTTCCCCCACCTAAGCCAACAGAAGAGACTATACAGAAGATAGAAGCTTTGTGTCAGCTTATTGCTGAGAATGGTGCTGATATTGAAGATAAGATTCGTCGAGATGAATTTCAGAATCCTGAATATGAATTTTTATTTGGTGGAGAGCCCGGAACCGAGGCTGCAATTTCTAACACATATTTCCTGTGGATGAAAAAGAAATATAATTTGGATAATGGATGGCATGAAAATAAAAGGCAATCAGAGATGGTATACTCTTCTAGTAAACGGTATATCCAGCATGTTGCAACTGTGAATGCTGATTCTGACATGGAAATGGAAGCCCTTATTGTTTGTATTGAATTTGTTGGATATTCTGGAGTACAGGTTACCCCTTGCACTTTAAAGAGTAAAGAAGACTGTCTACTTGATATAGTTTTGCTAGCAGTAGTTCTAAGACGACTGTGCGTGTGTTGGGCTGGGTCTGGGGCCGATGATATCACACTTTCTGACAAGGACCAAGGTTCAAATTATGCAACTGAAGGCCTAACTCAGCAACATAACCCGGATGATGAAGATGAAGTGTTTAGTGTGAATCAGAATATACGGCAGCTGCAGAAATTATCAGACAATGACCCTGCCAAGGACATCTCATCCTGCAGTGCATCATACTTTGGATCCATGGGAGTCAGCAAACGGAATGAAGGACCAGAGATTTTATCTGATTCGGAGCACAGCAAATCTGTAAGATCAGTTACAAGGGTTTGTTGTAGTCCTGAGAATAACTCCACAGAAGTGGCTGAATTGCCCTTGGGCACAGCTTTAGAGAAAACTGCAGATTGTGTAGATGATGATTTCACCCAAACTGGTACTTCTGATCACAATGAAACCACTACTACTGAACGGGATTATGGGCCATTCCTAACAAGTGGTAGCCCAATAAGACTTCTTCAAGATTATGCTTCTGATGACACTTCAGCTAATGAGGATGAAGGCAATGCTGCAGATACTAATGTTTTCACATTCTCAGGAGGTGCTGATACTGGTGTTTCAGCTGTCCATAAAGGTTCTGGGAGTCATATGGAGATTGGAATTGGATCTAATAGTCCCTCCAGTACCCAAAAGGGGTTTCGGTCAGTCTCCAGAACACTGCAGAATGATTCAGAAATATCTCCACATTTATTACAAGAGTCTAAGAAAACCCGTAAAAAATCTGTCTCTCGATGGAGTAGTGATGGAGGTATTGAGCATAACCTTGAAAACCAGGTGTCTGTTAATTTTTCTGCTTCAGTGGAAGCTATCAAGGGAAAAGATAGACTAGACGATACTGGCATTGACAGTGGCAGTAAAAGTGGTTATGCTGAAAAGGAAGATGAGGGGAAAACCTCAAAATTTGAACCAAATGTTATTAAAGTGGATGAATTCGGAAGACATCTCAGAGAAGTTCGTTCAGATAGTGATTCTGATGATTCACACCATCACCGGGCAAGGAGACATAATAAAAGAGATAGAAGCTGTAGTCGCAGCCGGTCTCCACCGGACAGGAGAAGTAGGAGGAATAGGAGGAGTCCCCGGAGGAGAAGAGATAAAAGAAACAGGTCTCGCAGCTGGTCCCCCCGGCATCGAAGAAGCAGTAGGTCTCCAATCTCAAGACGTTCAGGTGACTTCCGTGGTGAGATTGTGAAAAGGGACAAGGATCAGTGCTTGGACTTCCTTCGAGGAAAGTGCTACCGAGGAGCATCATGCAAGTACATTCACCTTGAATCTGACATGAATGCTACATCAAGGCGCCATAGGAATAAACATGACCTGGAAGTCAGTTCTTGTGGAAAAGGATCTACAGCTAATGGAGACATGACCAATATTTCTTCTAAAGTGTTTGATAGTAAGCGTGATGGAGTTAAAAGTCAGGATGTGGATCTTTGCCAGAATGTGACTAGCCAGGAAGTAGTGCGGAAAGAAGATTCAGGGAGGAATGATGTTGCATCAATGATCATGCATCTTGATGGTAAATTAGTAAATAGCAATTCAATTAAATCTAAATGTATCAGAGAGGTTGCTCCTGAAATACTGGAAACCATTGTTGTCAGGGAGGATCCTAAGAATTCAATCCATGAAAATGATGGTTCAAAAGCAGGCGATTCTCAGCAGCAACATTTGGTTGAAGGCTTTCACCTTGATGCTTTAGGCAGTGATAGTAATTCTAAGCTATCTGGTACATATAAAGATGTTTTTCCCTCAGGAGATGGTCCATTTGTTCAGCAAATGCATCTCAATGTTTCTGCTGTTGGAATTCCTGAACCTTCTGGTTACCCATCTCAGCATGTAAGTGCATCCTTTGTGACTGATACATCACCTGATAAAAGATCAGTTGTTTCTGCTAGTGTTAATGAAGTTCCTGGTAGTGTCACATCAGAGCAGCCTTCATTACACTCTCAGGCTCCGAAAGAGTTACCTCCTCCGCTTCATAATTACCAGTTGCCTGCTTCTGTTGTTTCACAATCCCCGGGTGAAAATCCTGTGCATATGTCACAAACTTCAAGGCAGTATGATGTGATGCAACAAAATGCGTTCTTTCCTTTCCAATCCACTACCAGAGAAAAGTTTGAACCTTATCCTGCTCCACTACACACTCAGAATTCTCACTTCAATGTTACACCTAATAGCTCTTGGACATCCTTGCCACTGCCACCACCACCGCTACCATTGCCACTGCCACCATCCAGAACGGTGTATGATTCCAGTTTAAACTCAGGAGTTGTAAAATCACATGTTTCTTCTGAATTCAATAAGAGTCAATTACATTCAAGAATTGACATTGTTTCTCAGACTTCCATGAAGCCTTTACCAACTTCTTCTCAGAGTTCTGAATTTCAGGATCATTCACGAACTTTCATGCTTACTGAACCGTTCTCTCCAAAGCATCTCCCTCTGGTGAACCCAGCTAGTCTTTCAGGATCTAGTCTCAATAGAGATGACTTTCATAATCAACTTCCAATGCAGGATTCAAAATTTCCCAGTACCACATCATTTGGCAGCCTGCAGCCTCAACCAAATCAATTTTCCTGGAAGATGGATGTGAGCAGACTACAATCTCCCCTGGGTGGCAAGTTACCTCCTGAAGGTCATTTTGCAACATCCTCACACCTTGATTCTTTATCTCAGAAGCAACAATCAATGTATAACTTTCAGTGTTCTGTATTCGAGGCTAGTTTGGGTGTGCCTGGGGAGACTGCTACTGTTTCCAGATATCCACCTGATTTTCTGGATAGCAATCATTCAACTTCTCTTCCACCATTTGGTGGTTCAAGAATATCTGCTCACTATAATCCTTATGCATCAACTTTTGAGAAACCACTAAGTTCCAAATTCAGTTCAAGTATTTTTAGGCAGGAAAATGAAATAATCCATGGTAACAATTATGTTTCTTCTAGATTTAACCATACTCCTGTAAATGGGGAGGGTAATGCTGGGGTTGGATCAAGACAGTCAGCATCCTCATCAAAATCAGGTAGAGCTCTTGGTCAGGTTTTACCTAGGTCTGGTGATGACCAATATGATCCACTTTTTGACAGCATTGAACCATCTTCCACTTTAAGAAAAACTGATTTTGATCAGAAGCAGGAACTTACAGGTGAATCCAACATCAGCCTAAGGCCCAAAAGTTCTTATATGTCTTTGGGTGCGGATGAGAAAAACAAGGAGTCGGAGGAGGTTGGGGCTGTTGCCTCTACCACTTCTCAAAATAATGATGAATATGGTGAGACAGCAGATGCAGAAGTTGGTGCTATTGAAAATGAGAGCCTAAGTGATGATGTGGATGTTGCAAAAATGACTGCAGAGGAGGTTGAGATTAATCAGGTCAAGTCTCCAGGGAAAAGAAAAAAGAGTAAGGATTCCAGATCCATGAAATTGTTCAAAGTTTCGATTGCGAACTTTGTCAAGGAGGTTTTGAAACCATCATGGCGACAAGGTAATATGAGTAAGGTGGCTTTTAAAACAATTGTGAAAAAGACCGTGGATAAAGTATCAGGAGCCATGAAAGGCCACCGAGTACCCAAGTCCCAAGTGAAGATAAGTCAATATATTGATTCATCACAGCGAAAGTTGACTAAACTTGTTATGGGCTATGTTGACAAGTATGTGAAAGTATGA 4992 0.4313 MIQIERGIRHWKHFGVILLLSSVPPVLPPPPQPPPPPPQYQQAPPHFHQFPPPNVGGPPPPPPNIGGPPPPPPPHHVYLNGPPPPPPPNSSSSVPLNLPVQGSLNVMPNTGQSYAIPSQLHHGSSMAPQASWAPGPQTRVLPPPPPPPPPSASQGQILYNPPFHRPPLQPGDVQNLHNAPPPPPPSSIYFHSTVGNYQVPPGIPPPLPSSPPPALPAPPPPPLTAPVTSFSSNAAGTGPHTAKFSGLESKTVNSVDESGIVPVNGSDSKLDGPSCRDVASAEKDDNLPPPKPTEETIQKIEALCQLIAENGADIEDKIRRDEFQNPEYEFLFGGEPGTEAAISNTYFLWMKKKYNLDNGWHENKRQSEMVYSSSKRYIQHVATVNADSDMEMEALIVCIEFVGYSGVQVTPCTLKSKEDCLLDIVLLAVVLRRLCVCWAGSGADDITLSDKDQGSNYATEGLTQQHNPDDEDEVFSVNQNIRQLQKLSDNDPAKDISSCSASYFGSMGVSKRNEGPEILSDSEHSKSVRSVTRVCCSPENNSTEVAELPLGTALEKTADCVDDDFTQTGTSDHNETTTTERDYGPFLTSGSPIRLLQDYASDDTSANEDEGNAADTNVFTFSGGADTGVSAVHKGSGSHMEIGIGSNSPSSTQKGFRSVSRTLQNDSEISPHLLQESKKTRKKSVSRWSSDGGIEHNLENQVSVNFSASVEAIKGKDRLDDTGIDSGSKSGYAEKEDEGKTSKFEPNVIKVDEFGRHLREVRSDSDSDDSHHHRARRHNKRDRSCSRSRSPPDRRSRRNRRSPRRRRDKRNRSRSWSPRHRRSSRSPISRRSGDFRGEIVKRDKDQCLDFLRGKCYRGASCKYIHLESDMNATSRRHRNKHDLEVSSCGKGSTANGDMTNISSKVFDSKRDGVKSQDVDLCQNVTSQEVVRKEDSGRNDVASMIMHLDGKLVNSNSIKSKCIREVAPEILETIVVREDPKNSIHENDGSKAGDSQQQHLVEGFHLDALGSDSNSKLSGTYKDVFPSGDGPFVQQMHLNVSAVGIPEPSGYPSQHVSASFVTDTSPDKRSVVSASVNEVPGSVTSEQPSLHSQAPKELPPPLHNYQLPASVVSQSPGENPVHMSQTSRQYDVMQQNAFFPFQSTTREKFEPYPAPLHTQNSHFNVTPNSSWTSLPLPPPPLPLPLPPSRTVYDSSLNSGVVKSHVSSEFNKSQLHSRIDIVSQTSMKPLPTSSQSSEFQDHSRTFMLTEPFSPKHLPLVNPASLSGSSLNRDDFHNQLPMQDSKFPSTTSFGSLQPQPNQFSWKMDVSRLQSPLGGKLPPEGHFATSSHLDSLSQKQQSMYNFQCSVFEASLGVPGETATVSRYPPDFLDSNHSTSLPPFGGSRISAHYNPYASTFEKPLSSKFSSSIFRQENEIIHGNNYVSSRFNHTPVNGEGNAGVGSRQSASSSKSGRALGQVLPRSGDDQYDPLFDSIEPSSTLRKTDFDQKQELTGESNISLRPKSSYMSLGADEKNKESEEVGAVASTTSQNNDEYGETADAEVGAIENESLSDDVDVAKMTAEEVEINQVKSPGKRKKSKDSRSMKLFKVSIANFVKEVLKPSWRQGNMSKVAFKTIVKKTVDKVSGAMKGHRVPKSQVKISQYIDSSQRKLTKLVMGYVDKYVKV 1663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02470 1663 MobiDBLite consensus disorder prediction 227 261 - -
Spst9g02470 1663 MobiDBLite consensus disorder prediction 1426 1453 - -
Spst9g02470 1663 MobiDBLite consensus disorder prediction 760 837 - -
Spst9g02470 1663 MobiDBLite consensus disorder prediction 199 226 - -
Spst9g02470 1663 MobiDBLite consensus disorder prediction 137 155 - -
Spst9g02470 1663 Gene3D Surp module 296 355 IPR035967 GO:0003723|GO:0006396
Spst9g02470 1663 SUPERFAMILY Surp module (SWAP domain) 287 353 IPR035967 GO:0003723|GO:0006396
Spst9g02470 1663 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 310 1662 - -
Spst9g02470 1663 MobiDBLite consensus disorder prediction 1050 1097 - -
Spst9g02470 1663 MobiDBLite consensus disorder prediction 641 693 - -
Spst9g02470 1663 MobiDBLite consensus disorder prediction 1051 1091 - -
Spst9g02470 1663 MobiDBLite consensus disorder prediction 672 689 - -
Spst9g02470 1663 MobiDBLite consensus disorder prediction 886 901 - -
Spst9g02470 1663 MobiDBLite consensus disorder prediction 94 132 - -
Spst9g02470 1663 MobiDBLite consensus disorder prediction 718 748 - -
Spst9g02470 1663 MobiDBLite consensus disorder prediction 875 901 - -
Spst9g02470 1663 MobiDBLite consensus disorder prediction 1426 1534 - -
Spst9g02470 1663 MobiDBLite consensus disorder prediction 28 93 - -
Spst9g02470 1663 MobiDBLite consensus disorder prediction 28 294 - -
Spst9g02470 1663 MobiDBLite consensus disorder prediction 641 671 - -
Spst9g02470 1663 MobiDBLite consensus disorder prediction 793 826 - -
Spst9g02470 1663 MobiDBLite consensus disorder prediction 276 290 - -
Spst9g02470 1663 ProSiteProfiles Zinc finger C3H1-type profile. 841 868 IPR000571 GO:0046872
Spst9g02470 1663 MobiDBLite consensus disorder prediction 1518 1533 - -
Spst9g02470 1663 MobiDBLite consensus disorder prediction 566 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02470 Spst-Chr9 58344777 58352509 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Spst9g02470 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02470 - - vum:124822814 2121.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02470 9 58344777 58352509 Spst9g02470 9 58344777 58352509 ECH