Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02466 ATGATGATGGCGAGTTCAAGAGAAGGTCAACAAGCTAAGCAAGAAGGTAGCATCATTAATGCTGACAAATTTTCCAAGGGATCGTCCACTACAAGACAATGGTCCGCGTTCAGAAATCCAAGAATTGTGAGAGTGTCGCGTTCTTTCGGAGGAAAAGATAGGCACAGCAAGGTTTGCACAATAAGAGGGTTGAGGGACAGAAGGATTAGGCTCTCAGTGCCCACAGCAATCCAGCTCTATGATCTTCAAGACAAGCTTGGGCTAAGCCAACCCAGCAAAGTGATAGATTGGTTGCTTGAAGCCACTAAGTTTGACATTGACAAGCTCCCTCCACTTCAATTCCCTCAGGGTTTTGGTCAATTTCATCATCCACAAACCCTACTCCCCTTTCATGATTCAAGTGCCTCTCAGCTTTCTCTAGGACCCTTCTGCGATTCTACCTCAACATTTGCAAGGGATGGTGGGATTCAAAACCTCATGGCAAAGTCAAGGTATTGGGATAGTATAGATCCCATATCAAGATTAAAAGGCAAGGAAGCTGAAAAGGGCAAGTGGGTCAAAACAAATGAGCAAGAAAATCATGAAGATGATGCTGTTGGAGACTACAACAACTTGCATGTTTCTACTCAGAGGCTTTTCCCAATGGGTAGTGGTACCACCACTACTCACTCCCTTTTACCTGGTTTGTTAAACAATACCATGTCATATAACCCCTACAATGCTGAGCCTTCTAGTTTGTCCTTATCCCAATTTGGAGGATATGGGTTGTTTCCTACCCAGCAGGTAGATCCCAGTCCAAGCGGTGGCAATGGTGTGCAGTTCCCATCTTCTATGCCATTACCTTCATCTGGTTCTCAAATTTTGTTTGGTTCATCTTCTGCTACACCATCAATGTTTACCTATGCTCCATTTATTACACCCTCAGTGGACAACGATCCTAGACAGTTCAACCACATCCAGTTCTTGAACTCAGGTTCTCAAGTCTTGCCTCATTCTCTCATGCCATCTCTTCACTCGTTCAATTCACATGTCAGACCCTTCCCAGCAGCACCCTTTAATTCAAAGCTTTTGGATTCAGATAGCATCCGTAGCCAACATGATAAGGGTAGCACTTCTTGA 1119 0.4433 MMMASSREGQQAKQEGSIINADKFSKGSSTTRQWSAFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLSQPSKVIDWLLEATKFDIDKLPPLQFPQGFGQFHHPQTLLPFHDSSASQLSLGPFCDSTSTFARDGGIQNLMAKSRYWDSIDPISRLKGKEAEKGKWVKTNEQENHEDDAVGDYNNLHVSTQRLFPMGSGTTTTHSLLPGLLNNTMSYNPYNAEPSSLSLSQFGGYGLFPTQQVDPSPSGGNGVQFPSSMPLPSSGSQILFGSSSATPSMFTYAPFITPSVDNDPRQFNHIQFLNSGSQVLPHSLMPSLHSFNSHVRPFPAAPFNSKLLDSDSIRSQHDKGSTS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02466 372 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 303 IPR005333 GO:0003700
Spst9g02466 372 Pfam TCP family transcription factor 51 167 IPR017887 -
Spst9g02466 372 ProSiteProfiles TCP domain profile. 51 109 IPR017887 -
Spst9g02466 372 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02466 Spst-Chr9 58232107 58233225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02466 35 347 TCP Transcription Factor Family AT5G60970 42.073 1.01e-52 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Spst9g02466 TCP 6.6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02466 - - gmx:100788984 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04770 3 99453039 99454103 Spst9g02466 9 58232107 58233225 PCT