Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02457 ATGGGTGGTAATAGAAGGCAGAGGCACCATTTCAGCAGAATCCATGCATTCTCGTGTGGGAAGGCTTCATTCAAAGGGGAGCATTCACTTATAGGGGGTCCTGGGTTCTCAAGGATAGTGTACTGCAACGAGCCCGAACGTGGTGAGGCGAGTTTTCTGAGTTATGGTGACAATTATGTGAGTACTACTAAGTATACAGTGGCTACTTTCCTACCCAAGTCCTTGTTTGAGCAATTCAGGAGGGTTGCCAACTTTTACTTCCTTGTCTGTGCAATTCTGTCTTTTTTCCCGGTTTCTCCTTACTCGGCTGTCAGCAATGTCATTCCTCTTGTTGTTGTGGTTGCTGCTACAATGGGTAAAGAGGCTGTTGAGGATTGGAGGAGGAGAAAACAGGATATAGATATGAATAACAGAAAGGTTAAAATGCACCATGGAGACGGTGTCTTTGACTATTCTAAATGGAAGGATTTGAAAGTTGGAGACATAGTAAAGGTTGAAAAGAATGAATTTTTCCCTGCTGATCTAATCTTACTTTCATCAAGCTACGATGATGCAATTTGCTATGTTGAGACCATGAATCTTGATGGAGAAACAAATCTAAAAATTAAACAAGCACTGGAAGTAACATCAAAGCTGCAAGAAGACTCGAGCTATAAAAATTTCAAGGCTATCATCAAATGTGAAGATCCTAATGCAAATTTGTACTCGTTTGTCGGCAGTTTGGAGCTTGAAGATCAATTGTATCCTCTTGCACCTCATCAGCTACTGCTTAGGGACTCAAAGCTTAGGAACACCGAGTTTATCTATGGTATGGTAATCTTTACAGGCCATGATACAAAGGTTATGCAGAATTCAACAGAACCTCCATCCAAGAGAAGCACAATTGAGAAACGAATGGATAAAATCATTTATTTTCTGTTCTTTGTCTTATTTTTAATATCTTTCATTGGTTCAATTTTCTTTGGGATTGCAACCAGGGAAGACCTTGAAAATGGAGTTATGAAGCGATGGTACCTCAGACCAGATAATACTACAATTTACTTTGACCCAAAGAGAGCACCAGTTGCAGCAACGCTGCAATTCTTGACTGCACTCATGTTGTATAGTTACTTGATTCCAATTTCTTTGTACGTTTCCATTGAAATTGTGAAAGTTCTTCAAAGCATTTTCATCAACCAGGATTTGCATATGTATTACGAGGAAACTGACCAGCCAGCTCATGCTCGTACTTCAAATTTGAATGAAGAACTTGGCCAAGTTGATACTATACTTTCAGATAAAACAGGAACTTTAACTTGCAACTCTATGGAATTCATCAAGTGTTCTATTGCTGGGATTGCCTATGGCCAAGGAGGAGTTACAGAAGTTGAGAGAGCTCTAGCCAGGAGAAAAGGATTACCTATAGGTGAAGAGTTTGCAGAAGATGGCAATGTTCCAAAGACTTCTGAAACAAAGTCTTCCATTAAAGGTTTTAACTTTATGGATGAACGAATCACAAATGGAAATTGGATCAATGAACCTCACGCCAATGTAATCCATAGCTTCCTGAGGTTGTTGGCAGTTTGCCATACTGCAATACCTGAAGTTGATGAAGAAAATGGTAAAGTTTCATATGAAGCTGAATCACCTGATGAGGCAGCTTTTGTGGTTGCAGCCAGAGAACTTGGATTTGAGTTTTATGAAAGGACACAGACAACTATCTCACTGCGTGAGTTCAATCCCAAATCACGCAAGACAACTGAAAGGTCCTACAAACTTCTGAATATACTAGAGTTTAGTAGTACAAGAAAGCGGATGTCTGTAATTGTAAGAGATGAGGAGGGGAAATTGCTACTATTTAGCAAGGGAGCAGACAGTGTCATGTTTGAACTACTTGCAAAGAATGGAAGGGAGTTTGAAGAAAAGACTAAGCAGCACATTGATGAATATGCTGACGCAGGTTTGAGGACCTTGATACTTGCATATCGGGAACTTGATGAGGAAGAATACAATCTATTCAATAAAGAATTTATGGAGGCCAAGAACTTAGTAAGTGCAGATAGGGAGCAAATTGTGGAGAAAATATCAGAAATGATTGAGAAGGACTTGATTCTTCTCGGTGCTACTGCTGTTGAAGACAAACTTCAAAATGGGGTTCCCGAATGCATTGACAAGCTAGCTCAGGCAGGAATTAAGCTATGGGTTCTGACTGGTGATAAAATGGAGACAGCAATCAATATTGGGTTTGCTTGTAGTTTGCTCAGACAAGGAATGAAGCAAATTATAATAAGTTCAGACACTCCAGAAATCAAATCATTGGAGAAAGTGGAGGACAAGTCTGCTGCAGCGGCGGCAATTAAGGAAAGTGTTATTCTTCAACTAAGGAAAGGAAAAGAATTACTTGCTGAATATGATGAAAACTCTGAGGCATTAGCTCTTATAATTGATGGGAAGTCTCTTACTTATGCACTAGAAGAAGATGTTAAGGACTTATTCCTTGCACTTGCTGTTGGCTGTGCATCTGTCATATGCTGTCGTTCATCTCCCAAGCAGAAAGCACTAGTTACTAGACTGGTAAAGATTAAAACAGGTAGTACAACTCTGGCAATTGGTGATGGAGCAAATGATGTTGGAATGCTTCAAGAAGCAGACATTGGGATTGGTATAAACGGTGTCGAAGGAATGCAGGCAGTTATGTCAAGTGATATTGCAATTGCCCAATTTCGATTTCTAGAGCGTTTACTTCTTGTGCATGGACATTGGTGTTACAGAAGAATCTCATCAATGATCTGCTACTTCTTTTACAAGAACATTACCTTTGGCTTCACTCTCTTCTTCTATGAGATCTACGCCTCGTTCTCGGGGCAGGCTGCATACAATGATTGGTACCTCTCACTATATAACGTATTCTTCACTTCCCTCCCTGTAATTGCCTTGGGAGTATTTGACCAGGATGTCTCTGCTAGACTATGTCTCAAGTTCCCATTATTATATCAAGAAGGTGTGCAAAATGTTCTCTTCAGCTGGAAACGGATCCTCGGTTGGGCGTTCAACGGAGTCTTGAGTGCTACCATAATATTCTTCTTCTGCATCAACGCAATGGAGAATCAAGCATTTCGCAAAGCAGGGGAAGTTGCTGACCTGGAAGTTCTTGGTGCCACCATGTACACTTGTGTGGTGTGGGTGGTGAATTCCCAAATGGCATTATCCATCAGTTACTTCACTTACATTCAACATTTGCTCATATGGGGTGGCATTATTTTCTGGTACATATTCCTCATAGTGTATGGAACAATGGACCCCACCCTATCAACCACTGCCTATAAGGTCTTGATTGAAGCTTGTGCACCGGCACCATTATACTGGCTCCTCACTTTGCTTGTGCTTGTTGCTTCACTCCTTCCATACTTCGCCTATGCTTCAATACAAATGAGGTTCTTCCCCATGTTCCATCAGATGATACAGTGGATTCGAAATGATGGGCAAACGACTGACCCAGAATACGTTCATGTGGTGAGACAGAGATCACTAAGACACACAACGGTTGGGTTCACGGCTCGTTTTGAATCATCGCAAAGTTCGAGAGCATCAAAGAGTATTCAAGTTTGA 3588 0.4086 MGGNRRQRHHFSRIHAFSCGKASFKGEHSLIGGPGFSRIVYCNEPERGEASFLSYGDNYVSTTKYTVATFLPKSLFEQFRRVANFYFLVCAILSFFPVSPYSAVSNVIPLVVVVAATMGKEAVEDWRRRKQDIDMNNRKVKMHHGDGVFDYSKWKDLKVGDIVKVEKNEFFPADLILLSSSYDDAICYVETMNLDGETNLKIKQALEVTSKLQEDSSYKNFKAIIKCEDPNANLYSFVGSLELEDQLYPLAPHQLLLRDSKLRNTEFIYGMVIFTGHDTKVMQNSTEPPSKRSTIEKRMDKIIYFLFFVLFLISFIGSIFFGIATREDLENGVMKRWYLRPDNTTIYFDPKRAPVAATLQFLTALMLYSYLIPISLYVSIEIVKVLQSIFINQDLHMYYEETDQPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGIAYGQGGVTEVERALARRKGLPIGEEFAEDGNVPKTSETKSSIKGFNFMDERITNGNWINEPHANVIHSFLRLLAVCHTAIPEVDEENGKVSYEAESPDEAAFVVAARELGFEFYERTQTTISLREFNPKSRKTTERSYKLLNILEFSSTRKRMSVIVRDEEGKLLLFSKGADSVMFELLAKNGREFEEKTKQHIDEYADAGLRTLILAYRELDEEEYNLFNKEFMEAKNLVSADREQIVEKISEMIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTPEIKSLEKVEDKSAAAAAIKESVILQLRKGKELLAEYDENSEALALIIDGKSLTYALEEDVKDLFLALAVGCASVICCRSSPKQKALVTRLVKIKTGSTTLAIGDGANDVGMLQEADIGIGINGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFFYEIYASFSGQAAYNDWYLSLYNVFFTSLPVIALGVFDQDVSARLCLKFPLLYQEGVQNVLFSWKRILGWAFNGVLSATIIFFFCINAMENQAFRKAGEVADLEVLGATMYTCVVWVVNSQMALSISYFTYIQHLLIWGGIIFWYIFLIVYGTMDPTLSTTAYKVLIEACAPAPLYWLLTLLVLVASLLPYFAYASIQMRFFPMFHQMIQWIRNDGQTTDPEYVHVVRQRSLRHTTVGFTARFESSQSSRASKSIQV 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02457 1195 CDD P-type_ATPase_APLT_Dnf-like 57 1023 - -
Spst9g02457 1195 Pfam Phospholipid-translocating P-type ATPase C-terminal 891 1141 IPR032630 -
Spst9g02457 1195 FunFam Phospholipid-transporting ATPase 699 903 - -
Spst9g02457 1195 SUPERFAMILY Calcium ATPase, transduction domain A 144 284 IPR008250 -
Spst9g02457 1195 Gene3D - 700 903 IPR023214 -
Spst9g02457 1195 SFLD C1.7: P-type atpase like 406 914 - -
Spst9g02457 1195 PRINTS P-type cation-transporting ATPase superfamily signature 863 882 - -
Spst9g02457 1195 PRINTS P-type cation-transporting ATPase superfamily signature 749 759 - -
Spst9g02457 1195 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Spst9g02457 1195 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 25 1154 - -
Spst9g02457 1195 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Spst9g02457 1195 SUPERFAMILY HAD-like 419 918 IPR036412 -
Spst9g02457 1195 NCBIfam phospholipid-translocating P-type ATPase 55 1148 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Spst9g02457 1195 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 1141 IPR023298 -
Spst9g02457 1195 FunFam Phospholipid-transporting ATPase 116 286 - -
Spst9g02457 1195 SFLD p-type atpase 406 914 IPR044492 -
Spst9g02457 1195 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Spst9g02457 1195 Gene3D - 539 699 IPR023299 GO:0000166
Spst9g02457 1195 NCBIfam HAD-IC family P-type ATPase 827 946 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g02457 1195 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 489 701 IPR023299 GO:0000166
Spst9g02457 1195 FunFam Phospholipid-transporting ATPase 541 699 - -
Spst9g02457 1195 Gene3D - 113 286 - -
Spst9g02457 1195 Pfam Cation transport ATPase (P-type) 522 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02457 Spst-Chr9 58018291 58024254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02457 10 1187 Primary Pumps ATPases AT1G68710 70.364 0.0 1793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02457 K01530 - gmx:100797039 2155.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02457 9 58018291 58024254 Spst9g02457 9 58018291 58024254 ECH