Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02439 ATGACCTCACCACTTTCTCATGACACCTCCATGGTTCAAGAGCTCCATCTCCATCACATGAGCATTCCTGTAACCATTGATAAAATGTTTTCTGTCATGCCATCAAGGCCTATTCCTGTTAAACCAGGTGACAGTTTATACCTGTCCAATCTCGATGACATGATTGGAGCTCGTGTTTTTACACCTACTGTGTATTTTTATCAATTAGACAACACGAGTTCTTCCCAAAAACCAGTCACAAAAATACTACAATGTGCTCTCGCTGATGTTTTAGTGCCTTATTACCCCCTCTCAGGCCGACTCAGAGAGACCAGTAATGGTAAACTGGAAGTGTTTTTTGGACCTGACCAAGGAGCACTCATCGTTGAGGCACGATCTGATATTGCCTTAACTGAATTAGGAGACCTCACAGCTCCAAACCCAGCTTGGGAACCTTTGATCTTCAAGTTTCCCAATGAAGAACAATACAAAGTCCTTGAAATGCCACTAGTCATTGCTCAGGTTACCCTTTTTCGCTGTGGTGGCTTTAGCCTTGGTTTGAGGCTGTGCCATTGTATCTGTGATGGCATGGGAGCTATGCAGTTCCTAGGTGCATGGGCTGCCACTGCAAGAACAGGGATGCTGGTTATAGACCCTGTGCCCTGTTGGGACAGGGAAATTTTCAGGCCACGTGACCCACCAGTGGTTAAATTTCCCCACATGGAGTTTATGAGAATTGAAGAGGGCTCCAACCTGACAATGAAACTATGGAAAACCAAGCCGGTTCAGAAGTGTTACAGGATCAAACGCGAGTTCCAGAATCGCGTGAAAGCTCTTGCTCAGCCATATGATGCTGCTGGTTGCACCACTTTTGATGCTATGGCAGCACATATTTGGAGATCCTGGGTGAAAGCTCTTGATGTAAGGCCTCTAGATTACCAGCTTAGGTTAACATTTTCGGTCAATGCTCGTCACAAGCTTAGAAACCCACCACTGAAAGAAGGGTTTTATGGCAATGTGGTGTGTGTTGCGTGCACATCAAGCACTGTCTCTGAGCTGGTGCATGGACAGCTCCCAGAAACAACCCTTTTGGTTCGAGAGGCCAGACAGAGTGTCTCAGAGGAGTATTTGAGATCCACAGTGGATTATGTTGAAGTGGATAGGCCAAGGCAACTTGAGTTTGGTGGTAAACTGACAATAACTCAATGGACTAGGTTCTCAATATACAAGTGTGCAGATTTTGGGTGGGGTAGGCCACTCTATGCTGGTCCTATAGATTTAACTCCCACCCCTCAAGTTTGTGTGTTTCTACCTGAAGGGGAGGCTGATTGTAATGATGGTTCTGTGATCGTCTGCATATGCTTGCCAGAGTCTGCTGCTCAAAAGTTCACACAAGCTTTGCTGCTCGATTCAGATTTGTGA 1401 0.4582 MTSPLSHDTSMVQELHLHHMSIPVTIDKMFSVMPSRPIPVKPGDSLYLSNLDDMIGARVFTPTVYFYQLDNTSSSQKPVTKILQCALADVLVPYYPLSGRLRETSNGKLEVFFGPDQGALIVEARSDIALTELGDLTAPNPAWEPLIFKFPNEEQYKVLEMPLVIAQVTLFRCGGFSLGLRLCHCICDGMGAMQFLGAWAATARTGMLVIDPVPCWDREIFRPRDPPVVKFPHMEFMRIEEGSNLTMKLWKTKPVQKCYRIKREFQNRVKALAQPYDAAGCTTFDAMAAHIWRSWVKALDVRPLDYQLRLTFSVNARHKLRNPPLKEGFYGNVVCVACTSSTVSELVHGQLPETTLLVREARQSVSEEYLRSTVDYVEVDRPRQLEFGGKLTITQWTRFSIYKCADFGWGRPLYAGPIDLTPTPQVCVFLPEGEADCNDGSVIVCICLPESAAQKFTQALLLDSDL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02439 466 Gene3D - 21 238 IPR023213 -
Spst9g02439 466 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 32 456 - -
Spst9g02439 466 Gene3D - 242 460 IPR023213 -
Spst9g02439 466 Pfam Transferase family 23 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02439 Spst-Chr9 57654938 57656338 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02439 36 461 Monolignol Biosynthesis Gene Families AT5G48930 31.121 1.68e-55 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02439 K15400 - gmx:100802814 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02439 9 57654938 57656338 Spst9g02439 9 57654938 57656338 ECH