Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02411 ATGATTCGTCGGAGTTTGAAAGATGAGAAGTTGCCACAGTATGTGCTGATAGCAATGATAACAGACCTTTTAGATACAAGTTTGGAAGCTATCTCCAGAAGTTACAATGACTCTACTTTTGGTTATCTTTTCATCATCAACAATAGGAGGTTCATACAGCTGAATTCAAAACGGTATGGATTGAAACCTATTTTTGGCCTTGATTGGCTCCACAAAAACACAACAGAATTCCAACAAAAACTTGAACTCTATCGAAGAAGTTCGTGGAATAAGATTGCGGACATTTTGAAGTTGGACATCAATGAGGCAGAGCCTAATGTTGCGGTGGAGTTGATGAAAAACAAGCTCCTTTCCTTCAATGAACACTTTGATGATATATGCAACTTTCAAGCTACGTGGTTTGTCTTGAATGAGGAGTTAAGGAAACACATTATAAAATCCATAGGAAACGTCTTGTTGCCAGCATATGGAAACTTCATTTCAAGGTTCCAGGATTTTCTTGGTAATCATGCTTACAAATACATCAAGCATGGAATGGTTGACGTTCAACATCGACTCAACAATTTGTTTCTTGTGAGGGAGTAG 585 0.3795 MIRRSLKDEKLPQYVLIAMITDLLDTSLEAISRSYNDSTFGYLFIINNRRFIQLNSKRYGLKPIFGLDWLHKNTTEFQQKLELYRRSSWNKIADILKLDINEAEPNVAVELMKNKLLSFNEHFDDICNFQATWFVLNEELRKHIIKSIGNVLLPAYGNFISRFQDFLGNHAYKYIKHGMVDVQHRLNNLFLVRE 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02411 194 PANTHER EXOCYST COMPLEX PROTEIN EXO70 12 190 IPR004140 GO:0000145|GO:0006887
Spst9g02411 194 Gene3D Exocyst complex component Exo70 4 194 - -
Spst9g02411 194 SUPERFAMILY Cullin repeat-like 8 190 IPR016159 -
Spst9g02411 194 Pfam Exo70 exocyst complex subunit 12 187 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02411 Spst-Chr9 57037532 57038116 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02411 15 190 EXO70 exocyst subunit family AT5G58430 40.449 9.19e-37 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02411 - - gmx:100795016 284.648