Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02399 ATGAGTTTTGCTCGAACAAGAAAAAAAACACAAAGCACAAGAAAAGAAGAAGGATCATCATTAATGTCAGAGCAGGAAACCGATTCATGGGGCTTCCTGTTTGTCTGTTTCTTGATCCTTTTCTCAGGTAAATTAGTTGTCGGGGATTCATTGGAAACTGACGCAAAAGTTCTGCTGAATCTGACATCCTATTTGCAAACGGCAACTCGTGCAAATAGAGGAGAGTACATGAACTGGAACAAGAACAGTTCTAATCCTTGTGATTGGTCAGGAATTCAGTGCAGCCTCTTGAACGGGACAACATGGAGGGTTGTGAAAGTAGACATCTCTTCCAGTGACATTTATGGTGAAATATTCCAGGGCTTCTCTCAACTCACTGAGCTCACACACCTTGACATCTCTTGGAACTCTCTCTCTGGGGAGATTCCTGATAACTTGAGGAGTTGCCACAAGCTTGTGTATCTCAATCTATCCCATAATACTCTTGCGGGGGAATTGAATTTGAAGGGATTGACTCAGTTGCAAACAGTGGACTTGTCAGTTAATAGGTTCTATGGGGAACTTGGGTTGAGTTTCCCTGCCATTTGTGACAGTTTGGTGACTTTGAATGTTTCAGATAATCACTTGAGTGGGGGCATTCAAGGCTTCTTTGATCAATGCTTGAGGTTGCAGAACTTGGATTTGAGCACCAACCATCTGAATGGGACCTTATGGACTGGATTTTCCAGGTTGAGAGAGTTCTCGATCTCAGAGAATTTTCTCACTGGGGTTGTTCTTCCCCAGGCTTTTCCAGTTAACTGTAGCATTGAAAAACTGGATCTTTCAGTGAATGAATTTGTTGGTAAGGTCCCCAAAGAGGTGTCTAACTGCAAGAATTTAGTGGTTCTCAACCTTTCTAGTAACAAATTCACTGGAGATATTCCCAGAGAAATCGGTTCCATTTCTGGTCTTGAGGGATTGTTCTTGGAGAACAATACTTTCTCAAGGGATATCCCAGAGACCCTTTTGAACTTGAACAATTTGTTCATCTTGGATTTGAGCAGAAACAAATTTGGTGGGGAGGTGCAGGGGATTTTTGGGAAATTCAAGCAACTGAAGTTTCTTGTGCTGCACACAAATTCCTACACTGGAGGATTGAACACATCAGGCATTTTTACATTGACAAACCTAAGCCGCTTGGACTTGAGCTTCAATAATTTTTCTGGGCCATTACCTGTTGAAATCTCACAAATGTCTTCACTCGCTTTCTTAACCCTAACCTACAACCAGTTCTCTGGACCTATTCCATCTGAATTGGGAAAGTTGACTCGCCTTATGGCTCTTGATCTTGCCTTCAACAGTTTCAGTGGACCAATCCCACCAAGCCTTGGAAACTTGACTTCTCTCTTATGGCTAACCCTTTCAGATAATTCATTAACCGGAGAAATCCCACCAGAGTTGGGAAACTGCTCAAGCATGTTATGGCTAAACCTTGCAAACAACAAACTCTATGGCAAAATTCCTTCCGAGCTAACAAGAATTGGAAGGAATGCAAGGGCCACATTTGAATCAAATGAAAAAAGTCTTGGGGGAGTTGTTGCTGGCAATAGTGAGTGCTTAGCAATGAGGAGATGGATACCTGCTGATTACCCTCCGTTCAGCTTTGTGTATACCATCCTAACAAGGAAGAATTGTAGGGCCCTTTGGGACAGGTTGCTCAAAGGATATGGTATCTTCCCCATGTGTTCTTCTGAGCCCTCCGCTAGATCATCACATATAGCAGGGTATATTCAGCTAAGTGGAAACCATTTGAGTGGTGATATCCCTTCAGAAATTGGGGCCATGGTGAACTTTAGCATGTTGCATTTGGGGGATAACAAGTTCACTGGGAAATTCCCTCAAGAGATGGTAGGTTTGCCACTTGTAGTCTTGAACATGACCAGAAACAATTTTTCTGGTGAAATTCCAGTTGAAATTGGCAACATGAAGTGTCTGCAGGATCTTGATTTGTCTTGGAACAATTTCTCTGGAACGTTTCCCATAAGTCTAGCACACTTGGATGAGCTTAGCAGGTTCAACATCTCATACAATCCCCTCATATCTGGTACAGTCCCACCAGCTGGACACTTACTCACTTTTGACAAGGATTCATACTTGGGTGACCCTCTCTTGAACCTCCCAAAGTTCTTTAACATCTCTGATGATAGAAATAGCACTTTACACAGAGTCTTCAAAAATCCCACAAAGTGGTCTTTGGTTTTGGCTCTGGCACTGGCTATCATGGTCTTTGGACTTCTTTTCCTTGTAATATGTTTCTTAGTGAAAAGTCCACCTAAGGAGCCAGGATATCACATGAAGAATACAAAGAAGCCACATGATTTAGTCAGCTCCGGATCCTCACCATGGTATTCTGACACTGTTAAGATATTCCACCTGAACAAGACAGTTTTCACACATGCAGACATCTTGAAAGCAACCTCCAACTTCACAGAAGAAAGAGTCATAGGAAGGGGTGGCTATGGAACAGTATATAGAGGGTCGTTTCCAGACGGGAGAGAGGTGGCGGTGAAGAAGCTCCAAAGGGAAGGAACTGAGGGTGAAAAAGAATTCAGAGCTGAAATGAAGGTTCTAAGTGGTCAGGGATTTAACTGGCCTCATCCAAACCTTGTCACACTCTATGGTTGGTGCCTCTATGGTTCACAGAAGATACTTGTTTATGAGTACATAGGAGGTGGAAGCTTGGAGGAACTCGTGACTGATACAAAAAGGTTGACATGGAAGAGGCGCCTAGAGGTGGCAAGTGATGTGGCTAGGGCACTTGTCTATTTACACCATGAGTGCTACCCTTCTATTGTGCATAGAGATGTGAAGGCTAGCAATGTGTTGCTAGACAAGGATGGAAAGGCCAAGGTCACAGACTTTGGACTTGCTAGGATTGTTGATGTCGGAGACAGTCATGTGAGCACTATAGTGGCTGGCACAGTGGGGTATGTTGCACCAGAGTATGGACAAACATGGCAAGCCACCACCAAAGGGGATGTGTACAGTTTTGGAGTGTTGGTTATGGAGCTAGCAACAGGGAGAAGAGCAGTGGATGGAGGGGAAGAGTGTTTGGTAGAATGGACTAGGCGTGTTTTGATGGGTCCTGGAAGACAAGGGTTAGGCCAATCTGTGCCAGTTTTGTTGAAGGGAAGTGGGGTTGTTGAAGGTGCTAAGGAGATGGGTGAGTTGCTCCGAGTTGGAGTGAAGTGCACACATGATGCACCACAGGCTAGGCCTAACATGAAGGAGGTTCTAGCTATGCTTATTAAGATATACAATCCCACTGGGGATTCAGATTATGGATACCTTGTGTAG 3336 0.4385 MSFARTRKKTQSTRKEEGSSLMSEQETDSWGFLFVCFLILFSGKLVVGDSLETDAKVLLNLTSYLQTATRANRGEYMNWNKNSSNPCDWSGIQCSLLNGTTWRVVKVDISSSDIYGEIFQGFSQLTELTHLDISWNSLSGEIPDNLRSCHKLVYLNLSHNTLAGELNLKGLTQLQTVDLSVNRFYGELGLSFPAICDSLVTLNVSDNHLSGGIQGFFDQCLRLQNLDLSTNHLNGTLWTGFSRLREFSISENFLTGVVLPQAFPVNCSIEKLDLSVNEFVGKVPKEVSNCKNLVVLNLSSNKFTGDIPREIGSISGLEGLFLENNTFSRDIPETLLNLNNLFILDLSRNKFGGEVQGIFGKFKQLKFLVLHTNSYTGGLNTSGIFTLTNLSRLDLSFNNFSGPLPVEISQMSSLAFLTLTYNQFSGPIPSELGKLTRLMALDLAFNSFSGPIPPSLGNLTSLLWLTLSDNSLTGEIPPELGNCSSMLWLNLANNKLYGKIPSELTRIGRNARATFESNEKSLGGVVAGNSECLAMRRWIPADYPPFSFVYTILTRKNCRALWDRLLKGYGIFPMCSSEPSARSSHIAGYIQLSGNHLSGDIPSEIGAMVNFSMLHLGDNKFTGKFPQEMVGLPLVVLNMTRNNFSGEIPVEIGNMKCLQDLDLSWNNFSGTFPISLAHLDELSRFNISYNPLISGTVPPAGHLLTFDKDSYLGDPLLNLPKFFNISDDRNSTLHRVFKNPTKWSLVLALALAIMVFGLLFLVICFLVKSPPKEPGYHMKNTKKPHDLVSSGSSPWYSDTVKIFHLNKTVFTHADILKATSNFTEERVIGRGGYGTVYRGSFPDGREVAVKKLQREGTEGEKEFRAEMKVLSGQGFNWPHPNLVTLYGWCLYGSQKILVYEYIGGGSLEELVTDTKRLTWKRRLEVASDVARALVYLHHECYPSIVHRDVKASNVLLDKDGKAKVTDFGLARIVDVGDSHVSTIVAGTVGYVAPEYGQTWQATTKGDVYSFGVLVMELATGRRAVDGGEECLVEWTRRVLMGPGRQGLGQSVPVLLKGSGVVEGAKEMGELLRVGVKCTHDAPQARPNMKEVLAMLIKIYNPTGDSDYGYLV 1111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02399 1111 ProSiteProfiles Protein kinase domain profile. 822 1110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02399 1111 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 167 358 - -
Spst9g02399 1111 Gene3D Transferase(Phosphotransferase) domain 1 903 1106 - -
Spst9g02399 1111 Gene3D Ribonuclease Inhibitor 261 357 IPR032675 -
Spst9g02399 1111 FunFam Putative LRR receptor-like serine/threonine-protein kinase 362 524 - -
Spst9g02399 1111 FunFam Leucine-rich repeat receptor protein kinase MSP1 786 901 - -
Spst9g02399 1111 Pfam Leucine Rich Repeat 128 149 IPR001611 GO:0005515
Spst9g02399 1111 SUPERFAMILY RNI-like 86 332 - -
Spst9g02399 1111 Gene3D Ribonuclease Inhibitor 358 526 IPR032675 -
Spst9g02399 1111 Gene3D Ribonuclease Inhibitor 193 260 IPR032675 -
Spst9g02399 1111 Gene3D Phosphorylase Kinase; domain 1 789 901 - -
Spst9g02399 1111 Gene3D Ribonuclease Inhibitor 50 192 IPR032675 -
Spst9g02399 1111 SUPERFAMILY L domain-like 272 693 - -
Spst9g02399 1111 Pfam Leucine rich repeat N-terminal domain 52 95 IPR013210 -
Spst9g02399 1111 CDD STKc_IRAK 828 1098 - -
Spst9g02399 1111 SUPERFAMILY L domain-like 589 724 - -
Spst9g02399 1111 ProSitePatterns Protein kinases ATP-binding region signature. 828 851 IPR017441 GO:0005524
Spst9g02399 1111 SUPERFAMILY Protein kinase-like (PK-like) 800 1096 IPR011009 -
Spst9g02399 1111 SMART LRR_typ_2 387 411 IPR003591 -
Spst9g02399 1111 SMART LRR_typ_2 338 361 IPR003591 -
Spst9g02399 1111 SMART LRR_typ_2 459 483 IPR003591 -
Spst9g02399 1111 SMART LRR_typ_2 125 149 IPR003591 -
Spst9g02399 1111 Gene3D Ribonuclease Inhibitor 587 731 IPR032675 -
Spst9g02399 1111 MobiDBLite consensus disorder prediction 1 22 - -
Spst9g02399 1111 SMART serkin_6 822 1097 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02399 1111 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 98 257 - -
Spst9g02399 1111 ProSitePatterns Serine/Threonine protein kinases active-site signature. 944 956 IPR008271 GO:0004672|GO:0006468
Spst9g02399 1111 Pfam Protein kinase domain 822 1026 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02399 1111 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 902 1103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02399 Spst-Chr9 56852158 56855795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02399 32 1106 Receptor kinase-like Gene Family AT1G55610 30.634 3.84e-143 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Spst9g02399 Pkinase 9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02399 - - gmx:100781769 1929.45