Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02394 ATGGCTCTCTTCCGAAGGTTCTTTTACCGGAAACCACCCGATCACCTCCTCGAGATCTCTGACAGACTCTATGTGGCACTGTGCACTTTTTCTGATTCTGTTTCTGGGCTTTGTGTTGCATTGGGTTTGATATATTCCATGTTTAAAGTGCCTCCTCTGTTTACTCTACTGTATAGGCTTGGTCATATTCTTCTAAGCTTCTGTTTTACGAATTGGGTTGAGATACCATGTGCTTCTAGTAATGTGTTGGAGGAAGATGAGTACAAGGTTTATATCGGGGGGGTTGTGGCTCAGCTACAGGATCACTATCCGGAAGCATCTTTCATGGTGTTCAATTTCAGAGAAGGGGATAAGCGCAGTCGAATTTCAGACATAATGTCTCAGTATGAGATGACAGTTATGGAGTACCCTCGGCAATATGAGAGTTGTCCCCTTTTGCCTTTGGAGATGATTCACCACTTCCTTCGGTCAAGTGAGAGCTGGTTGTCTTTGGAGGGCCAACAAAACGTGCTTTTGATGCATTGTGAAAGGGGTGGTTGGCCTGTGCTTGCGTTTATGCTAGCTGGTCTTCTGTTGTACAGGAAACAGTACAATGGGGAACACAAGACTCTTGAAATGGTGTACAAGCAAGCACCTAGAGAACTTCTCCACCTTCTATCTCCTTTGAATCCACAACCTTCTCATTTGAGATATCTTCAGTACATCTCCAGGAGGCATTTGGGTTCTCAGTGGCCTCCATCAGAAACACCCTTATATTTGGATTGCATTATTCTTAGGGTCCTTCCATTGTTTGATGGTGGAAAAGGTTGCAGACCGGTTGTGCGTGTCTATGGTCCGGACCCTTCAAAACCTTCCAACAGAAGTTCTAAGCTTCTTTCCTCAACTTCAATGAGCCAAAATCATGTTCGCCACTACTTGCAGGCAGAATGTATGCTCGTGAAAATTGACATCCATTGTCATGTTCAAGGGGATGTGGTTCTTGAGTGCATGCATTTATGTGATGATCTTGTTCGTGAGGAGGTGATGTTTAGAGTCATGTTTCATACTGCGTTTGTACGGTCAAATATATTGATACTGAGCCGCGATGAAATTGATATTCAGTGGGATTCAAAGGATCAGTTCCCCAAGGACTTCAAATTTGAGGTACTTTTTTTGGACGCTGATGCTGTTATACCTAATCTAACAACAGTCGATGGGAGTGACTCAGAATGTGCTTCACCTGAGGCTGAGGAATTCTATGAAGCAGAAGAGATCTTCAGCAATGTAATTGATGCACTGGAAGGTAAGGGAGATTACGATTTTTCAATGGTTCATGACAGTGAAGTAGATGATGGAAGTCATAAAGAGATCTGGAAAGAGTATTCGGACCCTCTTACTTTTCTGGATTCCATGTTAGATGATGGGATTCACCAACAGGTTGATGAAGTGAGGTACAAGCTTGACAAGAGGGTCGTTTCAGATACTCATGATGTCAAAGATATTGGTGTGGATTATGGAGTCACTTTTATGCCAAAGGAAGTCACTGTGGATGCACATGATAAGTTGGCAGTTTTGCAAAACAAGTATGATGAAGATAACAATGAAACAGAGGAAGGGCTGCAGGGGCTTGATATTTCACGACCAAAATCTGACAAATTACTTATTTCTGCTGAAAATAAACAACTTCCTTCAAACTCAAAGCCCAGGGGAGATTCAGTCGTTGCAAACCAAGAACCACATGGTTTTCAGGCAAATCAAGCAAAACCCAATGCAACAACTAGGTTGATTCCTTCTAATAAGGGTTCTTGTCAAGATTCCATGATTGTCTCATATCCACCATCAAGGAACAATAATTTATCACTTAAGGAGGAAACTAGTGATGCTAAAGGAGAATCTACTTCTGGTTCTGATGTTTCTGAAGCAATTGTTTTTATGGACACGATAAATGACCTGAAAAACTCTGATGGTGATAACTCAAAATCTTCAGACAGTGTAGCTGAAATAGGCTCAAACTCTCCACTATCATCATTTCTGTCAGTCCAAGGGATATCTCTTCAATTAACTACTCAAGCATCACAACAGAGCTATGATCCAATGTTACAACTTTATCTTCCTCCACCTCCTCCTCCACCTCCACTTCCAAATTTTGGGCAGAATAGAGGGAGCTTCATGACTCCTTCTACCCATTGGAAATCTGTTGGAAAAAATAATGGTGCTTTACCTCCTTCCCCTGCTCCTCCCATTGCAAATAGTGTAATTACATCAAAAGTTTCACTACCACCGCCACCTCCTCCTCCTCCTCCCCCTCCTATGCAATCTACAAATGGAGCTCCAGTCCCTCCTCCCTCAATGTCTCCAACAATGTTTAAAGCTCCACCTCCTGCACCCCCACCGCCACATCATCCTCCACCTCCTCCTTTAAGTACTGCTCCACCACCTCTTCCTCCTTCATTATCCAGAGCTTCACCTCCACCACCACCACCACCACCTATTCCTCCATCAAGTGGAGCTCCACCTCCACCACCACCTTCTTCAATGTCTAGAGCTCCACCTCTACCACCATCTTCTTCACTTTCTAGAGCTCCACCTCCCCCACCTCCACCAACTCGTGGACCACCACCACCTGCAATGCATGGAGGCACACCACCACCTCCAGGGGGACGAGGCCTACCTCCTACTGGAATGCGTGCTCCTGGTGCTCATTCTCCTTTTGGCCCTCTAGGTGGTGCTCCTTTTCCTTCACAAATTGGAACCGATACAAGAGGGAGAGGGCGTGGACTTGGACGTCCGACAGGGGCTGGTGCCATGGCAACTCGGAGATCCTCCTTAAAGCCTCTGCATTGGAGTAAGGTAACAAGGGCATTGCAAGGAAGTTTATGGGACGAATTACAAAGACGTGGAGAACTTCAAATAACGCAAGAGTTTGACGTTTCAGAGATAGAGAAGCTTTTTTCTGCAAATGTTCCAAAACCTGCTGATTCCGATGGTAAATCCGGTGGGCGGCGCAAATCTGTTGGATCCAAAACTGACAAAATTCACTTGATTGACCTAAGGAGGGCCAATAATACTGAAATTATGCTCACAAAGGTTAAGATGCCACTTCCTGATATGATGGAAAAGACTAGCAATGCCTTACGATACAGAATGCTGAACAATGAAGTAGCAAAAAAGAAAAAAATATCAGCCAAGTTTTGTAGAGATGAGAATCTTGTAGTGTATGAAAGGAGAGGACAAACAAGAAAAGATAAGATGATGACTGAATTTGCCAGAGATAAATTAGGAGCAGCACTTGTTAATAAGGAAAAGATTCTAGAATCTCACATAATAAGAGCCCAGTAA 3318 0.4382 MALFRRFFYRKPPDHLLEISDRLYVALCTFSDSVSGLCVALGLIYSMFKVPPLFTLLYRLGHILLSFCFTNWVEIPCASSNVLEEDEYKVYIGGVVAQLQDHYPEASFMVFNFREGDKRSRISDIMSQYEMTVMEYPRQYESCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYNGEHKTLEMVYKQAPRELLHLLSPLNPQPSHLRYLQYISRRHLGSQWPPSETPLYLDCIILRVLPLFDGGKGCRPVVRVYGPDPSKPSNRSSKLLSSTSMSQNHVRHYLQAECMLVKIDIHCHVQGDVVLECMHLCDDLVREEVMFRVMFHTAFVRSNILILSRDEIDIQWDSKDQFPKDFKFEVLFLDADAVIPNLTTVDGSDSECASPEAEEFYEAEEIFSNVIDALEGKGDYDFSMVHDSEVDDGSHKEIWKEYSDPLTFLDSMLDDGIHQQVDEVRYKLDKRVVSDTHDVKDIGVDYGVTFMPKEVTVDAHDKLAVLQNKYDEDNNETEEGLQGLDISRPKSDKLLISAENKQLPSNSKPRGDSVVANQEPHGFQANQAKPNATTRLIPSNKGSCQDSMIVSYPPSRNNNLSLKEETSDAKGESTSGSDVSEAIVFMDTINDLKNSDGDNSKSSDSVAEIGSNSPLSSFLSVQGISLQLTTQASQQSYDPMLQLYLPPPPPPPPLPNFGQNRGSFMTPSTHWKSVGKNNGALPPSPAPPIANSVITSKVSLPPPPPPPPPPPMQSTNGAPVPPPSMSPTMFKAPPPAPPPPHHPPPPPLSTAPPPLPPSLSRASPPPPPPPPIPPSSGAPPPPPPSSMSRAPPLPPSSSLSRAPPPPPPPTRGPPPPAMHGGTPPPPGGRGLPPTGMRAPGAHSPFGPLGGAPFPSQIGTDTRGRGRGLGRPTGAGAMATRRSSLKPLHWSKVTRALQGSLWDELQRRGELQITQEFDVSEIEKLFSANVPKPADSDGKSGGRRKSVGSKTDKIHLIDLRRANNTEIMLTKVKMPLPDMMEKTSNALRYRMLNNEVAKKKKISAKFCRDENLVVYERRGQTRKDKMMTEFARDKLGAALVNKEKILESHIIRAQ 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02394 1105 SUPERFAMILY Formin homology 2 domain (FH2 domain) 855 1034 - -
Spst9g02394 1105 Gene3D Protein tyrosine phosphatase superfamily 71 254 IPR029021 -
Spst9g02394 1105 MobiDBLite consensus disorder prediction 692 934 - -
Spst9g02394 1105 MobiDBLite consensus disorder prediction 574 631 - -
Spst9g02394 1105 MobiDBLite consensus disorder prediction 574 614 - -
Spst9g02394 1105 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 96 236 IPR029021 -
Spst9g02394 1105 Gene3D - 255 384 - -
Spst9g02394 1105 MobiDBLite consensus disorder prediction 750 884 - -
Spst9g02394 1105 PANTHER FORMIN-J 1 779 - -
Spst9g02394 1105 ProSiteProfiles Formin homology-2 (FH2) domain profile. 926 1105 IPR015425 -
Spst9g02394 1105 SMART PTEN_C2_2 246 386 IPR014020 -
Spst9g02394 1105 MobiDBLite consensus disorder prediction 711 727 - -
Spst9g02394 1105 MobiDBLite consensus disorder prediction 988 1002 - -
Spst9g02394 1105 Pfam C2 domain of PTEN tumour-suppressor protein 247 384 IPR014020 -
Spst9g02394 1105 Gene3D Formin, FH2 domain 927 1051 IPR042201 -
Spst9g02394 1105 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 248 384 IPR035892 -
Spst9g02394 1105 MobiDBLite consensus disorder prediction 980 1002 - -
Spst9g02394 1105 ProSiteProfiles C2 tensin-type domain profile. 248 387 IPR014020 -
Spst9g02394 1105 MobiDBLite consensus disorder prediction 694 709 - -
Spst9g02394 1105 Pfam Formin Homology 2 Domain 932 1035 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02394 Spst-Chr9 56730980 56736099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02394 1 611 FH2 protein (formin) Gene Family AT5G07740 57.188 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02394 - - pvu:PHAVU_009G184800g 1166.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02394 9 56730980 56736099 Spst9g02394 9 56730980 56736099 ECH