Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02389 ATGAGGGGTGGGAGAAGGAGAAGTATGATAAAGCTTAAGCTTAGCAAGATCTACTCATTTGCTTGTGGTAAAACAACCTTGAAGAGAGAACATTCACGGATTGGGGGACATGGTCATTCCAGGGTGGTTTTCTGTAATGAACCTGATAGGTTTGAGGGAGGGGTTTCGAATTATGCTGATAATTCTGTTAGGTCCACAAAATATACTGTTGCCACTTTCTTGCCTAAGTCACTTTTTGAGCAGTTTAGGAGGGTGGCTAATTTCTATTTTTTGGTGGCTGGAATCTTGGCCTTCACAAAGCTCACTCCTTATACTGCTGTCAGTGCTATCCTTCCACTCTCTATCATCATTGGGGCAACTATGGTGAAAGAGGGTATTGAAGACTGGCGCAGGAAAAAGCAGGATATTGAGGTGAACAATAGAAGAGTTATATTGCATAAAGGTGATGGCATTTTTGAATATACTGAATGGAAGAATCTGAGAGTAGGGAATATAGTGAAGATAATAAAGGATGAATTCTTCCCCGCGGACCTCCTACTGCTTTCCTCCAGTTATGAGGATGCAGTCTGCTATGTTGAGACCATGAACTTGGATGGTGAAACAAATTTGAAGTTGAAACAAGGGCTAGATGTAACTTCTTCCTTACAGGAGGACTTCAAATTCCGTGATTTTAGAGCTGTCATCAAATGTGAAGACCCAAATGCAAATTTGTATTCATTTGTCGGGAGCATGGAGTTTGGAGCACAAAAGTATCCACTTTCTTCTCAGCAACTTCTTCTGAGAGACTCCAAACTACGCAATACAGACTATGTGTTTGGAGCAGTCGTCTTTACCGGTCATGACACAAAGGTTATTCAAAACTCCACTGATCCTCCTTCAAAAAGAAGCAAAATTGAGAAGAAGATGGATAAGATTATCTACTTCTTGTTTTGTGTTTTATTTCTAATTGCATTTATTGGATCTATTCTCTTTGGCATCACAACCAAAGGTGACCTGGACAATGGGTTAATGAAAAGATGGTATCTAAGACCAGATAGGTCCACAATTTTCTTTGATCCGGAAAGAGCAGCTGCAGCTGCTATATTTCATTCCTTAACAGCCTTAATGTTGTACAACTTCTTTATTCCTATCTCATTGTATTTCTCAATAGAGATTGTCAAAGTCCTTCAGAGCATCTTCATCAATCGAGATATCCACATGTACTATGAAGAAACAGACAAACCAGCTCGTGCTCGTACTTCAAACTTGAATGAGGAGTTAGGCCAAGTTGACACAATACTATCTGATAAAACTGGAACTTTGACCTGCAACTCAATGGAGTTCATCAAATGTTCTGTTGCTGGAGTGGCTTATGGTCGTGGTTTAACAGAGGTTGAGCAATCGATGGGAAGAAATAATGGTTCACCTATACTTCATGAGCATATTAATGGTTTAAATTCAGAATCTAATGAAATCAGGGACTCTCCTGGTAGAAAAGAACCTATCAAAGGTTTTAACTTTACAGACGAAAGGATAATGAATGGAAACTGGGTTAATGAGCCTAATGCAGATGCTATACAGAAATTTTTTCGCTTATTGGCAATTTGTCATACTGCCATACCAGAAGTGGATAAAGAAACAGGAAATGTCTCATATGAGGCTGAATCTCCGGATGAAGCAGCATTTGTGATTGCTGCAAGAGAAGTTGGTTTTAAATTCTACAAAAGGACCCAGACTTGTTTGTCAATGTATGAGTTGGAACCTGTTTCTGGCCATGAAGTTGAAAGTTTGGTAGTGTTGGGCATGGGGGAGAGTGTTGGAAAGCTAGCTTTATTGTGGTTGTTGAAAGAGACAAAAATAGATGGAAGAGATACTGAGCAGTGTGTCATGGATGATGGTACTGCTTTGAAACAATGGACATACAAGCTTCTTAATGTTTTAGAGTTTAGTAGTTCAAGGAAGCGAATGTCAGTGATAGTGAAAGATGAAGAAGGGAGAATTTTTCTACTCTCTAAAGGTGCTGACAGTGTCATGTTTGAAAGGCTTGCCAAGAATGGGATGACGTTTGAAGAGAAAACTCTGGAACATGTGCAGGAATATGCTGATGCAGGTCTAAGGACCCTAATACTTTCTTATCGTGAGCTTGATGAAGAAGAATACAAGGAGTTTGATCATAAATTTTCTGAAGTAAAAAATTCAGTCGCAGAAGACAGGGAAACACTGATTGAAGAAGTATTGGATAAGATCGAGAGGAATCTAATCCTTCTTGGTGCCACTGCTGTAGAGGACAAGCTCCAAAATGGGGTTCCTGACTGTATGGACAAGCTTGCCCAAGCTAAGATTAAGATTTGGATTTTGACTGGGGATAAAATGGAGACTGCCATCAATATTGGTTTCTCTTGTCGCTTGCTTAGACAAGGAATGAAACAGATTATAATTCATTTGGAGACTCCAGAAATTAAAGAATTAGAAAAGGTTGGAGACAAGATGGCTATTTCCAAGGCATCAAGGGAAAGCGTGCATCATCAGCTATCTGAAGGTGCTCAACTGCTTTTTGCATCCAGAGGGACCTGCCAGCAAACATTTGCGCTGATAATTGATGGAAAATCACTAACCTATGCTCTAGAGGATAATATGAAAATCATGTTTCTAGAGCTTGCAAGTCATTGTGCATCTGTTATCTGCTGTCGCTCATCGCCGAAGCAGAAGGCTCTGGTTACTAGACTGGTCAAATCTGGAACTGGTAAAACAACATTAGCTATTGGTGATGGAGCTAACGATGTTGGAATGCTTCAAGAAGCAGATATAGGGATTGGAATCAGTGGTGTTGAAGGAATGCAGGCCGTTATGTCTAGTGATATTGCAATTGCACAGTTCCAGTATTTGGAAAGATTACTTCTTGTACATGGACATTGGTGTTACCGGAGGATGTCATCAATGATATGCTATTTTTTCTACAAGAATATCACATTTGGGTTCACCTTATTCTTGTATGAGGTGTATGCATCATTCTCTGGACAGCCGGCATACAATGACTGGTTTTTGTCACTGTATAGCGTGTTCTTCTCGTCACTTCCTGTAATTGCCCTTGGGGTCCTTGACCAGGATGTATCTGCCAGGTACTGCCTGATGTTTCCTATCCTATATCAAGAAGGTGTGCAGAATGTCCTCTTTTGCTGGCGTCTAGTACTGAGTTGGATGCTTAATGGATTTATTAGTGCCACAATGATATTCTTCTTCTGCACCAAAGCAATTGAGCCTCAGGCCTTCGATGAGGAGGGAAGAACCGCCGGAAGGGATATGCTGGGTGTGACAATGTACACTTGCGTGGTTTGGGTGGTGAACTTGCAGATGGCACTTGCTATACGTTACTTCACCTTGATACAACATATTTTTATCTGGGGTTCCATTGGTTTCTGGTATCTTTTCCTCCTAGCATATGGAGCAATGCCTCCAAAATTTTCTACAAATGTTTATAAAGTCTTCGTTGAAACTCTTGTCCCGTCTCCCTCTTTTTGGGTTGTGACATTCTTTGTGGCGGTCTCAACACTTATACCATACTTCACATGCTCAGTAATTCAGATGTGGTTCTTCCCCATGTATCACCAAATGATACAATGGATAAGGTATGAGAGGAAGACAAATGGCCCTGAATAA 3636 0.4051 MRGGRRRSMIKLKLSKIYSFACGKTTLKREHSRIGGHGHSRVVFCNEPDRFEGGVSNYADNSVRSTKYTVATFLPKSLFEQFRRVANFYFLVAGILAFTKLTPYTAVSAILPLSIIIGATMVKEGIEDWRRKKQDIEVNNRRVILHKGDGIFEYTEWKNLRVGNIVKIIKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLDVTSSLQEDFKFRDFRAVIKCEDPNANLYSFVGSMEFGAQKYPLSSQQLLLRDSKLRNTDYVFGAVVFTGHDTKVIQNSTDPPSKRSKIEKKMDKIIYFLFCVLFLIAFIGSILFGITTKGDLDNGLMKRWYLRPDRSTIFFDPERAAAAAIFHSLTALMLYNFFIPISLYFSIEIVKVLQSIFINRDIHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGVAYGRGLTEVEQSMGRNNGSPILHEHINGLNSESNEIRDSPGRKEPIKGFNFTDERIMNGNWVNEPNADAIQKFFRLLAICHTAIPEVDKETGNVSYEAESPDEAAFVIAAREVGFKFYKRTQTCLSMYELEPVSGHEVESLVVLGMGESVGKLALLWLLKETKIDGRDTEQCVMDDGTALKQWTYKLLNVLEFSSSRKRMSVIVKDEEGRIFLLSKGADSVMFERLAKNGMTFEEKTLEHVQEYADAGLRTLILSYRELDEEEYKEFDHKFSEVKNSVAEDRETLIEEVLDKIERNLILLGATAVEDKLQNGVPDCMDKLAQAKIKIWILTGDKMETAINIGFSCRLLRQGMKQIIIHLETPEIKELEKVGDKMAISKASRESVHHQLSEGAQLLFASRGTCQQTFALIIDGKSLTYALEDNMKIMFLELASHCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFQYLERLLLVHGHWCYRRMSSMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSLYSVFFSSLPVIALGVLDQDVSARYCLMFPILYQEGVQNVLFCWRLVLSWMLNGFISATMIFFFCTKAIEPQAFDEEGRTAGRDMLGVTMYTCVVWVVNLQMALAIRYFTLIQHIFIWGSIGFWYLFLLAYGAMPPKFSTNVYKVFVETLVPSPSFWVVTFFVAVSTLIPYFTCSVIQMWFFPMYHQMIQWIRYERKTNGPE 1211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02389 1211 NCBIfam phospholipid-translocating P-type ATPase 58 578 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Spst9g02389 1211 NCBIfam phospholipid-translocating P-type ATPase 629 1199 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Spst9g02389 1211 Gene3D - 597 723 IPR023299 GO:0000166
Spst9g02389 1211 FunFam Phospholipid-transporting ATPase 119 289 - -
Spst9g02389 1211 Pfam Cation transport ATPase (P-type) 539 675 - -
Spst9g02389 1211 PRINTS P-type cation-transporting ATPase superfamily signature 427 441 - -
Spst9g02389 1211 PRINTS P-type cation-transporting ATPase superfamily signature 914 933 - -
Spst9g02389 1211 Pfam Phospholipid-translocating ATPase N-terminal 44 109 IPR032631 -
Spst9g02389 1211 SUPERFAMILY HAD-like 422 969 IPR036412 -
Spst9g02389 1211 SUPERFAMILY Calcium ATPase, transduction domain A 145 286 IPR008250 -
Spst9g02389 1211 Gene3D - 114 290 - -
Spst9g02389 1211 NCBIfam HAD-IC family P-type ATPase 886 996 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g02389 1211 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1203 - -
Spst9g02389 1211 Gene3D - 745 954 IPR023214 -
Spst9g02389 1211 SFLD p-type atpase 411 965 IPR044492 -
Spst9g02389 1211 CDD P-type_ATPase_APLT_Dnf-like 60 1074 - -
Spst9g02389 1211 SFLD C1.7: P-type atpase like 411 965 - -
Spst9g02389 1211 FunFam Phospholipid-transporting ATPase 749 954 - -
Spst9g02389 1211 ProSitePatterns E1-E2 ATPases phosphorylation site. 429 435 IPR018303 -
Spst9g02389 1211 Pfam Phospholipid-translocating P-type ATPase C-terminal 942 1192 IPR032630 -
Spst9g02389 1211 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 505 750 IPR023299 GO:0000166
Spst9g02389 1211 SUPERFAMILY Calcium ATPase, transmembrane domain M 58 1192 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02389 Spst-Chr9 56656867 56667615 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02389 3 1211 Primary Pumps ATPases AT1G68710 68.629 0.0 1768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02389 K01530 - gmx:100798329 2123.21