Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02387 ATGGCAAACAAGGTGTTTGCTAGAAGATATTGCAGTGCTGGATGCCTTCATGCCACATACTTGGAAAAAGAGTTTTGGAATGAAATTGGTTGTGGGAAGATGGAAACTGTTGAATATGCATGTCATGTTGCTTTAGAATTTGAAAGGGTAGTCAGAGAACATGTGTACACTAATATTTTATCAAGTGACGGGGAAGATGGCGCCTTCGATGTTCTCCTAGGGAAAATAACTCTATTTCCACCAAATATTTTGTTAGAGCATGAAGTCCCTGTCTACAAGGCCGTTCAAAAGCCAGGGGAGTTTATAATAACCTTCTCCACAGTTGAAACCATGACTGAAGCCAGCATGATATGCTCTGGGGGAGGTCCTAACGTCTTGGTGGTTTAA 387 0.416 MANKVFARRYCSAGCLHATYLEKEFWNEIGCGKMETVEYACHVALEFERVVREHVYTNILSSDGEDGAFDVLLGKITLFPPNILLEHEVPVYKAVQKPGEFIITFSTVETMTEASMICSGGGPNVLVV 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02387 128 Gene3D Cupin 42 111 - -
Spst9g02387 128 Pfam JmjC domain, hydroxylase 46 106 IPR003347 -
Spst9g02387 128 PANTHER LYSINE-SPECIFIC DEMETHYLASE 44 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02387 Spst-Chr9 56584550 56585191 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02387 41 105 C2H2 Transcription Factor Family AT5G04240 35.385 3.75e-07 45.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Spst9g02387 JmjC 2.4e-08 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02387 - - gmx:100798611 123.635