Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02360 ATGGAGAATCAGCAACTCACATTTTGGAAGTCTAATTATGAAATTGATGAAAACCCATTTGCACCAACCTACCAATTTTCTATATATGATTATTGCAGGGCTAATGCTAATGATGGGTTTCACTGGCCCTATGAATTTCCTCTGCAAGAGAACTATCTTGATGCTATCCCTTTCATGAAGTGTTATTATCCTCATGACATTTTATATGAAACTTTGCCTATTGAACCAACTCCACTAAGCGTTCAAGACTACGACTTCAGTGATTTTCAAAACGTGCTTTCGGCGTGGAATGAAATTGACTGTTCAAATCATAAACCTGCGTTTTCTTCAAGCAACGATGGTGAAAGTGTGAATGAGATGAGAGAAGAAGTTAAGGGAAAACAACGCAGAGAAGAGAGAATTAGTAACAGTGCGAGAATGTTATCAAGGAAAACTGTTTCTCAGTACTTCTACATGCCAATATCACAAGCTGCAAAAGAGCTTAATGTTGGTCTCACACACTTGAAGAAAAGGTGCAGGGAATTAGGTATTCAAAGGTGGCCACATAGGAAGCTGATGAGTCTTCAAACCCTTATAAAGAATATGCAAGAGCAAGGAGAGGCTGTGGGGCATGAAAATGATGAAAAAATTAGGACTGCCATTGAAATGTTGGAGAAAGAAAAGAGCATGGTGGAGGAAATGCCAGATTTGGAACTAGAAGATAAAACAAGAAGGCTTAGACAAGCTTGTTTCAAGGCTAACTACAAGAAAAGGAAACTCATGGGCATGTTCATGGAACCTCAATCTTCCCTTAGTGGCCTATCCAACAAGTATTGA 816 0.3897 MENQQLTFWKSNYEIDENPFAPTYQFSIYDYCRANANDGFHWPYEFPLQENYLDAIPFMKCYYPHDILYETLPIEPTPLSVQDYDFSDFQNVLSAWNEIDCSNHKPAFSSSNDGESVNEMREEVKGKQRREERISNSARMLSRKTVSQYFYMPISQAAKELNVGLTHLKKRCRELGIQRWPHRKLMSLQTLIKNMQEQGEAVGHENDEKIRTAIEMLEKEKSMVEEMPDLELEDKTRRLRQACFKANYKKRKLMGMFMEPQSSLSGLSNKY 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02360 271 MobiDBLite consensus disorder prediction 116 135 - -
Spst9g02360 271 ProSiteProfiles RWP-RK domain profile. 124 208 IPR003035 -
Spst9g02360 271 PANTHER PROTEIN RKD4 122 260 IPR044607 GO:0003700
Spst9g02360 271 MobiDBLite consensus disorder prediction 107 135 - -
Spst9g02360 271 Pfam RWP-RK domain 141 188 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02360 Spst-Chr9 55886843 55888128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02360 16 256 AtRKD Transcription Factor Family AT1G18790 41.152 4.40e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Spst9g02360 RWP-RK 3.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02360 - - gmx:100782238 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02360 9 55886843 55888128 Spst9g02360 9 55886843 55888128 ECH
Spst3g04699 3 98794395 98799929 Spst9g02360 9 55886843 55888128 PCT