Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02354 ATGTGTGATCATGGTTCTAGCCTTTTTAAGGTGAAGTACATGATGCTTCTCTCACAATTCTTCACTTTGATATGGCGTTGGTGGAGGCTCCTCATGCCTTCTTGTGTATGTATTACTCATGGCCTAAGTGAACAATCCAGACCTTTCAACATCAAACTTGTCTATGGCCTTTCTATTCTTCTTCCCCCACCGAATTCCCCATCCAATAATATGAAGCTTGGTGTAAATGTAAACTACACGTATCAGGATCTATGCAGGGAAGGAGACGTACTTTTCAACTCCTCAAAAGGAGAAATCCCAAGTTTTACTCGCAATGACTTAAAACAAGAAAAATTAAAGGAATCTGGTGTGTTTTGGAAAGAAGAAAAGGGTGGTCATTCATGTATGAATGTGGGGAATGGTCTTATATCTATTAGAATCTTAGGTGAGCTATCAATTCTGGACGACAATTCTAGGGTTGTGGTGCTGAAAAGAGATGTGGCCAACACTTCATCTTCAGTGATCACAAACGTAAGATATGGGGAGTGTCAGAAGAATCATGCAGCCAATATTGGAGGGTATGCCGTGGATGGTTGCAGGGAGTTCATGGCTAGTACAGGGGATGGAGGTGGTGGGGCTCTTACATGTGCTGCTTGTGGCTGCCACAGGAACTTTCACAGAAGGGAAGTGCAAACTGAGGTAGTATGTGAGTACTCTCCTCCTAATTCCGCTCGCTAA 717 0.431 MCDHGSSLFKVKYMMLLSQFFTLIWRWWRLLMPSCVCITHGLSEQSRPFNIKLVYGLSILLPPPNSPSNNMKLGVNVNYTYQDLCREGDVLFNSSKGEIPSFTRNDLKQEKLKESGVFWKEEKGGHSCMNVGNGLISIRILGELSILDDNSRVVVLKRDVANTSSSVITNVRYGECQKNHAANIGGYAVDGCREFMASTGDGGGGALTCAACGCHRNFHRREVQTEVVCEYSPPNSAR 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02354 238 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 172 223 IPR006456 -
Spst9g02354 238 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 173 222 IPR006456 -
Spst9g02354 238 Pfam ZF-HD protein dimerisation region 170 223 IPR006456 -
Spst9g02354 238 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 162 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02354 Spst-Chr9 55782675 55786164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02354 152 236 Zinc finger-homeobox gene family AT1G18835 75.294 1.10e-38 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Spst9g02354 ZF-HD_dimer 8.9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02354 - - gmx:100785967 152.91