Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02334 ATGGATTCTCTGAAAATGTTCAAAGGTTACGGCAAAGTAGAACGAGATCAGCACCGAATCAAAGATCAAGAGCGCAACCCGAAATACAAAATCTCGATCGCCACTACGATTTCCATCTTCGCAATCCTCTTCCTCACTCTAACCTTGATCTTCACCCTCGCATCCATTATTCACCACCAAAACACCGAATCACAGCAGCTTCTCAACTCGGCAGAGTCCATCCGAGTCGTCTGCAACGTCACGCGCTTCCCCGATGCATGCCTCGCCGCCATCCGGCCATCCGTCAACGCCACCGATCCCCAAACCATCCTCGCTCTCTCGCTGCGCGCGTCACTCCACGCTCTCCAGAGCCTCGCTTCCTCACTCAACGCGACGAAGGGACGCGCGTTCGCTGACTGCAAGGACCATCTGGATGATGCGCTGAGTCGACTCAACGACTCGCTGTCGGCCGCGGCAGCGCTGACCGACGCGACGGTGGCTGATGTGCAGACGTGGGTGAGCGCGGCGGTGACGGACCAGCAGACGTGCTTAGACGGACTGGAAGAGGCGGGTGACGTGGTGGGTGTTGAGAAGATGAAGAAAATGATGAAGACATCGGACGAGTATGTGAGTAACAGTTTAGCTATTGTTGCCAATATTCGTAATTTGTTTCGCCACTTCAATATGACGCTCCATTGA 678 0.5442 MDSLKMFKGYGKVERDQHRIKDQERNPKYKISIATTISIFAILFLTLTLIFTLASIIHHQNTESQQLLNSAESIRVVCNVTRFPDACLAAIRPSVNATDPQTILALSLRASLHALQSLASSLNATKGRAFADCKDHLDDALSRLNDSLSAAAALTDATVADVQTWVSAAVTDQQTCLDGLEEAGDVVGVEKMKKMMKTSDEYVSNSLAIVANIRNLFRHFNMTLH 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02334 225 CDD PMEI-like_3 77 213 - -
Spst9g02334 225 FunFam Pectinesterase 70 214 - -
Spst9g02334 225 NCBIfam pectinesterase inhibitor domain 45 212 IPR006501 GO:0004857
Spst9g02334 225 PANTHER PECTINESTERASE 47 211 - -
Spst9g02334 225 SMART PMEI_2 69 209 IPR006501 GO:0004857
Spst9g02334 225 Gene3D Invertase/pectin methylesterase inhibitor family protein 69 215 IPR035513 -
Spst9g02334 225 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 73 213 IPR035513 -
Spst9g02334 225 Pfam Plant invertase/pectin methylesterase inhibitor 73 209 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02334 Spst-Chr9 54865527 54866204 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02334 1 225 Carbohydrate Esterase AT1G53840 32.031 3.66e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02334 - - gmx:100789567 238.81