Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02326 ATGCGTAAGCACGATTCGCACCCTTCTGAGATTGACGACGGAAAACGGAAACCCGCGCTTTCCCTTCTTGGAATTGATCATGATGTTGCTTCACTTACAGACCCAACCCAACCCAACAAAACACACTCAGAGGAGAAAGAGCGAAAACCAAACTCTCTCTCCCACGTTGAGCGCTATATATTCCACATTCCGAACATCTTCACACCGGGGGAGAGAGGTCACGCGCAAACCATGACGACCAATCTCACCGGTTTCCCATTGGTGTTGAACCAATTCAGAGCTCTGTTGAAGAAGAATCTGTTACTATCATGGCGGAACAAGAGAGCGAGCCTTCTACAATTGCTATCCCCTCTGATATTCATTTTCCTGATATTCGCCATCGACAAGGCGATCAAGGCTCAGACCTCCACCACCTCCGCCTACAAGAGCGTCACCGACCCTCCCACCCAACCCTCTCCCCCCATCACTCCCTGCGAAGACAAGTTCTTCATCAAACTCCCCTGCTACGACTTCGTTTGGAGCGGTGACCAAAACCCTAACCTCCAAACCATCGTCACCCGCATCATGAACAACAACCCCGGCAGACCCATCCCTCCCTCCAAGGTGAAGTCGTTTAAGGACAGGACCGAAGTGGACGCGTGGCTGTTCAATAACCCTATGCGTTGTCCAGGGGCGCTTCATTTCGCGGAGCAAAACGCCACCGTTATAAGCTACGGTCTTCAGACCAACTCCACCAGTCTTCAGAGGCGAGGCAAATATGAGGACCCTACTGTGTCGTTTCAACTTCCTCTTCAGCTTGCCGCCGAGAGGGAGATTGCCAGATACCTTATTGGAGACCCGGGTTTCAGTTGGAATGTGTTTCTGAGGGAATTCGCGCACCCTTCCATGACTCCTTTCTCTGCCGTGGGTACAATTGGTCCCGCGTTTTTTCTCGCCATCGCCATGTTTAATTTTGTTCTTCAGATAAGCTCCTTGGTGACGGAGAAAGAGCTTAAACTTCGCCAGGCAATGACTATGATGGGCCTTTACGACTTTGCTTACTGGTCGTCCTGGCTCATTTGGGAGACGGTTGTCACAATCCTATCGTCCCTCCTCATAGTACTCTTTGGAATGATGTTCCAGTTTAGATTTTTCTTGAAAAACAGTTTCGCGGTCCTGTTTTTTTTGTTCTTCCTATTTGAACTTAATATGACTGGCTTGGCCTTCATGTTATCTGCTTTCATTAAAAAGTCGTCTTCGGCAACAACAATGGGATTTTCTATATTTATTGTGGGCTTTTTGACTCAGCTTGTGGTACAAGGAGGATTTCCTTACAAGGATAGTTTCTCCAAAACTTTACGAGATTTGTGGTCGATATTCCCACCCAATCCTTTTTCTCAAGGTATACAAGTGCTTTCAGATGCAGTTGCAACTTCTGAAGATAATGGTGTTAGATGGAGTAAACGAGGAGAATGTGCTCATACTGATGCAGACTGTGTGATAACCATTGATGATATTTATAAATGGCTTGCAGCTACATTCGCTCTTTGGTTTGTTCTGGCCATTTACTTTGATAATATAATCCCAAATGCATCGGGTGTGAGGAAATCAATATTCTACTTTCTAAATCCCAGTTATTGGACAGGAAAAGGGGGTCAAAAAGTGAAAGAGGGTGGTCTTTGTAGTTGTGTGGGTTCAACCCCACTTCAAGAAATAAGTACACCAGATGATGAAGATGTCCTTGAAGAAGAAAGCAAAGTGAAACAGCAACTAACAGAAGGTCTGGTTGATGCAAATGTTGCTGTTCAGATACATGGACTTGCAAAGACATATCCTGGTACACGTAACATTGGCTGCTGCTTCAAATGTAAAAAAACTGCCCCTTACACTGCTGTTAAGGGTTTGTGGGTGAACTTTGCAAAGGATCAATTGTTTTGTCTTCTAGGACCCAATGGAGCTGGAAAAACTACAGCCATTAATTGTTTGACAGGGATAACTCCAGTAACTAACGGAGATGCATTGATTTATGGACATTCAATCAGAAATTCTGTTGGCATGTCAAATATTCGAAAGCTTATAGGAGTATGTCCACAGTTTGATATACTATGGGATGCACTGTCTGGCCAAGAACACCTCCAACTCTTTGCTACTATTAAAGGGCTGTCCCCAGCTTCCATAAAATCAATTACCCAGACTTCATTAGCAGAGGTGAGACTCACGGATGCAGCCAAAGTGAGAGCTGGAAGTTACAGTGGAGGAATGAAACGCCGTCTTAGTGTTGCAATTGCTCTTATTGGTGACCCAAAGTTAGTCATTTTGGATGAACCGACTACTGGTATGGATCCAATAACAAGAAGGCATGTGTGGGACATAATCGAAAATGCAAAAAGAGGACGTGCCATTGTTCTTACAACTCACTCTATGGAAGAAGCTGACATTCTAAGTGATCGCATAGGAATCATGGCAAAAGGAAGGCTTCGCTGCATTGGCACCTCAATCAGATTAAAGTCACGTTTTGGTACTGGTTTTATTGCTAATATCAGCTTCTATGGAAACAATATTGAACGTAGTCCTACCAATGGAGATGCAATATCTACAGAACATCGTGAGGAAGTGAAGAAATTCTTTAAGAATCATTTAGATGTAGTGCCAAAAGAGGAGACCAATAACTTCCTAACTTTTGTGATTCCTCATGACAGAGAGGCGCTCTTGACAAATTTCTTTTGGGAGCTCCAAGATAGAGAAGAAGAATTTGGCATTTCTGACATCCAGCTTGGTCTTACAACTCTCGAAGAAGTTTTCTTGAATATTGCAAGACAAGCAGAGCTAGAAAACGCTACAGCTGAAGGGAGGCTAATAACCCTGACCTTAACATCTGGGGAATCCGTGCAGATTCCTGTAGGAGCTAGGTTTGTGGGAATTCCAGGAACAGAGTCTGGGGAAAACCCAACTGGGTTTATGGTAGAAGTTTATTGGGAGCAAGATGATACTGGGGCTCTATGCATTGCTGGCCACTCGCAGAAGGTTCCTGTTCCTCATGGAGTTCAATTATCTTCCTCTCCTTCTGTAAGGCACCGTAGATCTTTCGGTCGGGCAGGACAAATTCACGGGGTTGTGATTGATCCTAGTCAAGTTAGTCCGGGTGATTTTCAGTGA 3135 0.4469 MRKHDSHPSEIDDGKRKPALSLLGIDHDVASLTDPTQPNKTHSEEKERKPNSLSHVERYIFHIPNIFTPGERGHAQTMTTNLTGFPLVLNQFRALLKKNLLLSWRNKRASLLQLLSPLIFIFLIFAIDKAIKAQTSTTSAYKSVTDPPTQPSPPITPCEDKFFIKLPCYDFVWSGDQNPNLQTIVTRIMNNNPGRPIPPSKVKSFKDRTEVDAWLFNNPMRCPGALHFAEQNATVISYGLQTNSTSLQRRGKYEDPTVSFQLPLQLAAEREIARYLIGDPGFSWNVFLREFAHPSMTPFSAVGTIGPAFFLAIAMFNFVLQISSLVTEKELKLRQAMTMMGLYDFAYWSSWLIWETVVTILSSLLIVLFGMMFQFRFFLKNSFAVLFFLFFLFELNMTGLAFMLSAFIKKSSSATTMGFSIFIVGFLTQLVVQGGFPYKDSFSKTLRDLWSIFPPNPFSQGIQVLSDAVATSEDNGVRWSKRGECAHTDADCVITIDDIYKWLAATFALWFVLAIYFDNIIPNASGVRKSIFYFLNPSYWTGKGGQKVKEGGLCSCVGSTPLQEISTPDDEDVLEEESKVKQQLTEGLVDANVAVQIHGLAKTYPGTRNIGCCFKCKKTAPYTAVKGLWVNFAKDQLFCLLGPNGAGKTTAINCLTGITPVTNGDALIYGHSIRNSVGMSNIRKLIGVCPQFDILWDALSGQEHLQLFATIKGLSPASIKSITQTSLAEVRLTDAAKVRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIENAKRGRAIVLTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFIANISFYGNNIERSPTNGDAISTEHREEVKKFFKNHLDVVPKEETNNFLTFVIPHDREALLTNFFWELQDREEEFGISDIQLGLTTLEEVFLNIARQAELENATAEGRLITLTLTSGESVQIPVGARFVGIPGTESGENPTGFMVEVYWEQDDTGALCIAGHSQKVPVPHGVQLSSSPSVRHRRSFGRAGQIHGVVIDPSQVSPGDFQ 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02326 1044 SMART AAA_5 634 818 IPR003593 GO:0016887
Spst9g02326 1044 Pfam ABC transporter 628 770 IPR003439 GO:0005524
Spst9g02326 1044 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 595 841 IPR003439 GO:0005524
Spst9g02326 1044 MobiDBLite consensus disorder prediction 29 52 - -
Spst9g02326 1044 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 621 823 IPR027417 -
Spst9g02326 1044 CDD ABC_subfamily_A 595 829 - -
Spst9g02326 1044 Pfam ABC-2 family transporter protein 110 516 IPR013525 GO:0016020|GO:0140359
Spst9g02326 1044 FunFam ABC transporter A family member 2 585 849 - -
Spst9g02326 1044 ProSitePatterns ABC transporters family signature. 743 757 IPR017871 GO:0005524|GO:0016887
Spst9g02326 1044 Gene3D - 595 839 IPR027417 -
Spst9g02326 1044 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 570 937 IPR026082 GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02326 Spst-Chr9 54585691 54591862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02326 638 840 Calmodulin-binding Proteins AT2G36910 23.474 2.53e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02326 - - gmx:100786538 1710.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02326 9 54585691 54591862 Spst9g02326 9 54585691 54591862 ECH