Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02323 ATGGAGTTTGGTTCAGAAAGATCTGGTCATGAAGTCAAGGACGAGAAGATAAGCGAATCTAGCGTTGGAGATGAAGAAGAACGTCGTGAACAAGAAATTGTTATGCAGGTGACCATGGAGCCACCCTTGGCTACCATCGAAAGATCCATTGTGAAGGCTGGGCCAAATGCTTCTTCCCTAGCCGAAAAGGAAGAGGTTGATGAACTTGAAAATGCCAAAGCCGAAATGGGTGAAGTGAGAGAAGAAAATCAAAGATTAAAGATGTGTTTGAACCGAATACTAAATGAGTACCGAACACTGGAAATGCAATTCAACAATATAGTTGAACAAGAGACAAAAGATTCTTCTGAGAAACCGAAGAATGATGATGAACATGGAGTAATGATGGAGGAATCAGAACTGGTTTCCCTAAGTCTTGGAAGACTTCCAGTTCCAAGAAACAATGAGAATAAAGGCAAAGTCCCTCAAACATTGAAAGAGGAAGAAGAAGATAAAGAAGGTTTGTCCCTTGGACTGGAGTGCAAATTTGAAACATCAAAATCTGGAAGCACAACTGAACATGTACCAAATCCAAGCCCTACCAATAGTGTTGAAGAAGTGCCAAAGGAAGAAGTTGCTGGGGAGAGTTGGCCACCAGGCAAGGGACAAAAGACAAATAGAGATGCTGGAGAGGATGAAGTTTCCCATCAAAATCCTGCAAAGAAAGCAAGAGTTTGTTTGAACGATGGATGTCAATGGAGGAAATATGGACAGAAGATTTCAAAGGGAAATCCTTGTCCTCGAGCTTACTATCGTTGCACTGTTGCACAATCATGTCCCGTGCAAAGATGTGCTCAAGACATGTCCATATTAATCACCACCTACGAAGGAAACCACAACCACCCTCTTCCTCTTTCAGCCACAGCTATGGCTTCCACCACTTCCGCAGCTGCTTCCATGCTAATGTCTGGATCATCAACCTCACACTCTGGTTTAAGACCTTCCACAACCATCACCACCACTGCTGCAGATCTTCATGGAATGAACTTTTTCCTATCGGATGGTTCCAAATCAAAGCAATACTACCTTTCCCATCCTGCACTCTCCTCTTCACCTTCACACCCCACCATCACTCTAGACCTCACTTCCAATCCATCATCCTCTTCAGCTCCTTTTGTCAAATTCACTTCAAGTTCAAACTACAACCCTCAAAGGTACCCTCCTTCCACGAGCCTAAGCTTCAGTTCCTCCCAATCTAATGCAAGTTCTTGGAGCGACGGGTTCTTCAGCTACAACACTCAACCGTATAATAACAACAGGAATATGAATGTGAATGTCCTTGGCAACCTAAACCTTGGAAGACGACAACAACAACAACCAATGGAGAACATCTACAGTTCCTTAATGCAAAGGAACAACAATCCAAACCCTCCAACACAACATTCTCTGCCAGACACAATAGCTGCAGCAACAAAAGTAATCACAGCGGATCCTAACTTTCAGTCAGCTTTGGCAGCAGCACTTACTTCTATTATTGGGTCAGGAAGCATTCAGGGAAACCAGGATGCTGCAGAAAATCTGAGTCAGAAAATGAAATGGGGTGAATTGTTTCCACCATCCTTTGCCTTACCTTCATCTTCAAAAGTCAATGGATGTGCTTCAAGCTTCTTGAACAAATCAGCAGCTAATTCACAACCAGGAAGTTTGATGTTTCTTCAGCCACCTTTGCCACTTTCTAGCCCCAAAAGCGCTTCTGGGTCTCCCGGAGATCACAGAGACAAGAAAAATTAG 1770 0.4345 MEFGSERSGHEVKDEKISESSVGDEEERREQEIVMQVTMEPPLATIERSIVKAGPNASSLAEKEEVDELENAKAEMGEVREENQRLKMCLNRILNEYRTLEMQFNNIVEQETKDSSEKPKNDDEHGVMMEESELVSLSLGRLPVPRNNENKGKVPQTLKEEEEDKEGLSLGLECKFETSKSGSTTEHVPNPSPTNSVEEVPKEEVAGESWPPGKGQKTNRDAGEDEVSHQNPAKKARVCLNDGCQWRKYGQKISKGNPCPRAYYRCTVAQSCPVQRCAQDMSILITTYEGNHNHPLPLSATAMASTTSAAASMLMSGSSTSHSGLRPSTTITTTAADLHGMNFFLSDGSKSKQYYLSHPALSSSPSHPTITLDLTSNPSSSSAPFVKFTSSSNYNPQRYPPSTSLSFSSSQSNASSWSDGFFSYNTQPYNNNRNMNVNVLGNLNLGRRQQQQPMENIYSSLMQRNNNPNPPTQHSLPDTIAAATKVITADPNFQSALAAALTSIIGSGSIQGNQDAAENLSQKMKWGELFPPSFALPSSSKVNGCASSFLNKSAANSQPGSLMFLQPPLPLSSPKSASGSPGDHRDKKN 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02323 589 ProSiteProfiles WRKY domain profile. 235 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst9g02323 589 Coils Coil 62 110 - -
Spst9g02323 589 MobiDBLite consensus disorder prediction 360 382 - -
Spst9g02323 589 MobiDBLite consensus disorder prediction 153 171 - -
Spst9g02323 589 MobiDBLite consensus disorder prediction 218 232 - -
Spst9g02323 589 Gene3D WRKY domain 227 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst9g02323 589 MobiDBLite consensus disorder prediction 557 589 - -
Spst9g02323 589 MobiDBLite consensus disorder prediction 108 233 - -
Spst9g02323 589 SUPERFAMILY WRKY DNA-binding domain 238 297 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst9g02323 589 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 58 515 IPR044810 GO:0003700
Spst9g02323 589 MobiDBLite consensus disorder prediction 1 31 - -
Spst9g02323 589 MobiDBLite consensus disorder prediction 176 197 - -
Spst9g02323 589 Pfam WRKY DNA -binding domain 241 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst9g02323 589 MobiDBLite consensus disorder prediction 111 130 - -
Spst9g02323 589 SMART WRKY_cls 240 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02323 Spst-Chr9 54479520 54484719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02323 76 511 WRKY Transcription Factor Family AT5G15130 39.104 2.06e-68 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst9g02323 WRKY 5.7e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02323 - - vun:114162352 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04674 3 98558976 98563009 Spst9g02323 9 54479520 54484719 ECH
Spst1g01301 1 15747518 15750569 Spst9g02323 9 54479520 54484719 ECH
Spst2g01560 2 14303160 14309711 Spst9g02323 9 54479520 54484719 ECH
Spst9g02323 9 54479520 54484719 Spst9g02323 9 54479520 54484719 ECH