Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02313 ATGGAGATGGGTCGTGTAGTGTTGATGCTGTTGGTGTTTTCCACCATTGTTGTATGCCCTTCTTCTCTTGCTCTCACGCAAGACGGACATACATTGTTGGAGATCAAAAGCACTTTGAATGACACAAGGAATTTTCTGAGCAACTGGAGAAAGTCTGATGAGTCTCACTGTACATGGACTGGTATCACTTGTCATCCTGGGGAACAACGAGTTAGCTCAATAAATCTACCTTATATGCAACTGGGGGGTATTATCTCTCCCAGCATTGGCAAACTCAGTAGATTGCATAGACTAGCACTTCATCAGAATGGCTTACATGGAGTTATTCCTAATGAAATTGGCAATTGTACAGAGCTTAGAGCACTGTACTTGAGAGCTAATTATTTGCAAGGAGGCATCCCATCAGATATTGGAAATCTTTCTTATTTACATGTATTGGATTTATCAAGTAACTCATTAAAGGGTGCTATACCATCTTCTATTGGCCGTCTTACACAATTGCGAGTTCTGAACTTGTCAACTAATTTCTTTTCCGGTGAAATCCCTGACCTTGGAGTACTAAGCACCTTCGGGAACAATGCGTTTATTGGGAACTTAGATCTTTGTGGGCGGCAAGTTCAGAAACCATGTCGGACATCACTCGGTTTCCCAGTGGTGCTACCACATGCAGAAAGTGATGAAGCTGCAGTTCCTGCCAAAAGATCTTCACATTACGTCAAGTGGTTGTTAATTGGTGCAATAACAATAATGGGGCTTGCACTTGTTATAACTCTTTCATTATTATGGATTTGTTTGCTATCAAAGAAGGAAAGAGCTGCTAGAAGATACATAGAAGTTAAGGATCAAGTCAACCCAGAATCAAGTAGAAAGAATGATGGTACAAAACTTATCACCTTCCATGGTGATCTCCCATACACATCATTTGAGATCATAGAAAAGTTGGAGTCTCTAGATGAAGATGATGTGGTAGGGTCTGGAGGATTTGGTACTGTATACCGTATGGTGATGAATGATTGTGGTACATTTGCTGTTAAGAGGATTGATAGAAACCGTGAAGGTTCTGATCAAGGTTTTGAAAGGGAACTAGAGATATTGGGTAGCATCAAGCACATAAATCTAGTTAACCTGCGTGGTTACTGTAGACTTCCTTCTACTAAGCTTCTAATATACGATTATTTGGCCATGGGAAGCTTAGATGATCTCTTGCATGACAACACTGAACGATCACTGAATTGGAATACTCGCTTAAAGATAGCACTTGGTTCTGCACGGGGTTTGGCTTATTTGCACCATGACTGCTGCCCGAAAATTGTGCACCGCGACATAAAATCTAGCAACATCCTTCTTGATGAGAACATGGAGCCTCGTGTCTCTGATTTTGGTCTTGCAAAGCTTTTGGTTGATGAAGATGCCCATGTTACCACAGTGGTTGCTGGCACGTTTGGTTATTTGGCACCAGAGTATCTACAAAGTGGAAGAGCCACTGAGAAGTCAGATGTGTATAGTTTTGGAGTGCTATTGCTAGAACTTGTAACTGGAAAGAGACCTACAGATCCTTCCTTTGCAAGGAGAGGTGTAAATGTTGTTGGTTGGATGAACACGTTCCTGAAAGAAAATAGATTGGAGGACGTAGTAGACAAAAGATGCACTGATGCAGATTCAGGATCTGTGGAAGTAATTCTTGAACTTGCATCAAGCTGCACTGATGCAAATGCGGATGAACGTCCATCAATGAACCAAGTATTACAGATACTGGAACAAGAGGTGATGTCTCCTTGCCCAAGTGATTTTTATGAGTCACATTCAGATCACTGA 1815 0.4143 MEMGRVVLMLLVFSTIVVCPSSLALTQDGHTLLEIKSTLNDTRNFLSNWRKSDESHCTWTGITCHPGEQRVSSINLPYMQLGGIISPSIGKLSRLHRLALHQNGLHGVIPNEIGNCTELRALYLRANYLQGGIPSDIGNLSYLHVLDLSSNSLKGAIPSSIGRLTQLRVLNLSTNFFSGEIPDLGVLSTFGNNAFIGNLDLCGRQVQKPCRTSLGFPVVLPHAESDEAAVPAKRSSHYVKWLLIGAITIMGLALVITLSLLWICLLSKKERAARRYIEVKDQVNPESSRKNDGTKLITFHGDLPYTSFEIIEKLESLDEDDVVGSGGFGTVYRMVMNDCGTFAVKRIDRNREGSDQGFERELEILGSIKHINLVNLRGYCRLPSTKLLIYDYLAMGSLDDLLHDNTERSLNWNTRLKIALGSARGLAYLHHDCCPKIVHRDIKSSNILLDENMEPRVSDFGLAKLLVDEDAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFARRGVNVVGWMNTFLKENRLEDVVDKRCTDADSGSVEVILELASSCTDANADERPSMNQVLQILEQEVMSPCPSDFYESHSDH 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02313 604 Gene3D Ribonuclease Inhibitor 25 212 IPR032675 -
Spst9g02313 604 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
Spst9g02313 604 ProSiteProfiles Protein kinase domain profile. 317 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02313 604 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 393 596 - -
Spst9g02313 604 SUPERFAMILY L domain-like 25 209 - -
Spst9g02313 604 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Spst9g02313 604 Gene3D Transferase(Phosphotransferase) domain 1 393 594 - -
Spst9g02313 604 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 73 586 - -
Spst9g02313 604 Gene3D Phosphorylase Kinase; domain 1 280 392 - -
Spst9g02313 604 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 187 - -
Spst9g02313 604 Pfam Protein kinase domain 320 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02313 604 SMART serkin_6 317 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02313 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Spst9g02313 604 SUPERFAMILY Protein kinase-like (PK-like) 294 586 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02313 Spst-Chr9 54272448 54276377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02313 24 594 Receptor kinase-like Gene Family AT2G35620 49.912 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Spst9g02313 Pkinase 4.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02313 - - gmx:100805042 1142.87