Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02310 ATGTATGCTATAGGAGGTAGTGCTAACCCAACCATTTTAAGTGAAGGGAATTTTTATGTAGCACCAAATGACCCAAGTGCAAAACAGGTAGAAATAGTGGCATCAAATGACCCAACCATTGGAAGTTGTGCTCCAAATTACTCACCTTCTCAATCTTTAAGTGTTGCTCCAACATACATGGTACCTGCAATAACTCTCAATGCAGGTCCCATAAATTGTATTGTTGGGAGAACATTGGTGCGTAAGGCGATCATGCGGCTGATTTTTTCATTCAATGAACTTGAGATAAAATACAACCCAACATCACATAAATATGCCAAGTGGGAAGCAAAAAGGCCTATGTAA 345 0.3942 MYAIGGSANPTILSEGNFYVAPNDPSAKQVEIVASNDPTIGSCAPNYSPSQSLSVAPTYMVPAITLNAGPINCIVGRTLVRKAIMRLIFSFNELEIKYNPTSHKYAKWEAKRPM 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02310 114 SUPERFAMILY Pectin lyase-like 1 77 IPR011050 -
Spst9g02310 114 Gene3D - 1 72 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02310 Spst-Chr9 54221718 54222387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02310 1 77 Polysaccharide Lyase AT1G11920 38.000 7.86e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02310 K01728 - gmx:100807483 110.153