Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02309 ATGGAGAAAAATATTGCTAAAATGTGTTTAAGAATCTGGGATGAAAAGATGATTAATGAGGAGATATTGAAAGAAGATTTAGAATTGTTATGCTTATCATCATTACTGTCAGTAGTGGTTGTTGTTGTTTTGTGTTTTCACTTGCCGTTTGAACATCACTTCAGTCCTGGATCCCAAAATTTGGTGTCACGGCCATTAAGTTGGGAGGGGAAGAGGAAGTGGTCTACCATGGGAGACAAGTCCCAAGTATTGGAGGCTGTTTTGAAGGAAACTGTAGATTTGGAGAACATTCCTGTTGAGGAGGTTTTTGAGAATCTGAGATGTAGCAAAGAAGGTCTCAGCAGTGAGGCTGCTGAGGAGAGGTTGGTCATTTTTGGCCACAACAAGCTTGAAGAGAAAAAGGAGAGAAAATTCTTGAAGTTCTTGGGGTTCATGTGGAATCCTCTGTCTTGGGTTATGGAGGCTGCTGCTATAATGGCAATTGCACTTGCCAATGGAGGGGGGAAGCCCCCTGATTGGCAAGATTTTGTTGGTATCATCACCTTGCTTCTCATCAATTCAACGATTAGTTTCATTGAGGAGAACAATGCTGGTAATGCTGCGGCAGCTCTCATGGCTCGGCTTGCTCCGAAAGCTAAGGTTCTTCGAGATGGTAGATGGAGTGAGCAAGATGCCTCAGTCCTGGTTCCCGGTGACGTAGTTAGCATTAAACTTGGTGATATTATACCAGCTGATGCTCGTCTACTTGAAGGAGATCCTTTGAAAATTGATCAGTCTGCTCTCACTGGTGAGTCACTGCCGGTTTCAAAGGGCCCTGGTGATGGAGTGTACTCTGGTTCTACCTGTAAACAAGGAGAGATTGAAGCTGTGGTCATTGCTACTGGCGTTCATACTTTCTTTGGGAAAGCAGCTCACCTTGTAGATACCACTAATCAAGTTGGACACTTTCAAAAGGTCTTGACTGCAATCGGGAACTTCTGCATATGTTCAATTGCTGTGGGGATGATTATTGAGATTATTGTGATGTATCCGATCCAAGATCGAGAATATCGCCCTGGAATTGATAACCTTCTTGTGCTTCTCATTGGTGGAATTCCAATTGCCATGCCCACTGTGCTCTCAGTGACTATGGCCATTGGTTCTCATAGGCTATCGCAGCAGGGGGCTATCACAAAGAGGATGACAGCTATTGAAGAAATGGCAGGCATGGATGTGCTGTGCAGTGATAAGACAGGGACCTTGACTTTAAATAAGCTTACCGTTGACAAAAATCTTATTGAGGTTTTTGCAAAAGGTGTGGATGTGGATACCGTTGTTTTGATGGCTGCTCAAGCTTCAAGACTTGAGAATCAAGACGCAATAGATACTGCCATAGTTGGGATGTTGGCTGATCCAAAGGAGGCTCGTATTGGTATCCAAGAAGTACATTTTCTTCCTTTCAATCCCACTGATAAGAGAACAGCATTGACTTATACTGATCGTGATGGTAAAATGCATAGAGTAAGCAAAGGTGCACCAGAACAGATCCTAAATCTTGCACACAATAAATCAGACATTGAACGTAGAGTTCATGCAGTTATAGATAAATTTGCAGAGCGTGGTTTACGAACCCTTGCAGTAGCATTCCAGGACGTTCCAGATGGAAAGAAAGAGAGTCCTGGTGGCCCATGGCAGTTTATTGGCCTTTTACCTCTGTTTGACCCACCTAGGCACGACAGTGCAGAAACAATACGCAGAGCACTTAACCTTGGAGTGAATGTCAAAATGATTACAGGGGATCAGCTAGCCATAGGAAAGGAAACTGGCCGTCGCTTGGGAATGGGTACCAATATGTATCCTTCATCTGCATTGCTTGGGCAGGATAAGGATGAATCCATATCTGCTTTACCCATTGATGAACTAATTGAAAAAGCAGATGGATTTGCTGGTGTTTTTCCTGAGCACAAGTATGAGATTGTGAAACGTTTGCAAGCTAGGAAACATATTTGTGGAATGACTGGTGATGGAGTGAATGACGCACCTGCCCTCAAGAAGGCCGACATTGGTATAGCTGTTGCTGATGCAACTGATGCGGCTCGAAGTGCATCTGATATTGTTTTAACAGAACCTGGCCTTAGTGTTATTATTAGTGCAGTGTTGACAAGCCGAGCTATTTTCCAGAGAATGAAAAATTATACAATTTATGCTGTCTCAATTACAATTCGTATAGTACTTGGTTTCATGTTACTAGCTCTGATATGGAGGTTTGATTTTCCACCTTTTATGGTGCTTATTATCGCCATTCTAAATGATGGTACTATCATGACAATTTCAAAAGATCGAGTAAAACCATCACCTCTACCTGATAGCTGGAAGCTAGCAGAGATATTTACTACTGGCATTGTACTTGGAAGTTACTTGGCAATGATGACAGTCATATTCTTTTGGGCAGCATACAAAACTAATTTCTTTCCGCGAGTGTTTGGAGTCTCTACACTCGAGAAAACTGCTCATGATGATTTTCGAAAACTAGCCTCTGCAATCTATCTTCAAGTGAGCACCGTTAGTCAGGCCCTTATATTTGTGACTCGCTCCAGGGGTTGGTCCTATGTTGAACGTCCTGGTATTTTGCTTGTGACAGCTTTCGTGATTGCTCAGCTTATTGCTACATTGATTGCGGTATATGCGAACTGGAGCTTTGCTGCCATTGAAGGCATAGGTTGGGGTTGGGCTGGTGTAATATGGCTATATAACATAATATTCTACATCCCTCTTGACCCCATCAAGTTTTTAATTCGATATGCTTTGAGTGGGAGGGCTTGGGAGCTTGTCATTGAGCAAAGGATTGCATTCACAAGACAAAAGGACTTTGGAAAGGAACAAAGGGAACTTCAATGGGCACATGCACAAAGAACATTGCATGGATTACAGCCACCTGACACCAAGATGTTCACTGAACGCACACATTTCAATGAACTCAATCAAATGGCTGAAGAAGCTAAAAGGAGAGCAGAAATTGCAAGGCTGCGAGAATTGCATACACTAAAGGGTCATGTAGAATCAGTTTTGAAATTGAAGGGGATTGATGTAGACACAATTCAGCAAGCATACACAGTTTGA 3099 0.4272 MEKNIAKMCLRIWDEKMINEEILKEDLELLCLSSLLSVVVVVVLCFHLPFEHHFSPGSQNLVSRPLSWEGKRKWSTMGDKSQVLEAVLKETVDLENIPVEEVFENLRCSKEGLSSEAAEERLVIFGHNKLEEKKERKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLLINSTISFIEENNAGNAAAALMARLAPKAKVLRDGRWSEQDASVLVPGDVVSIKLGDIIPADARLLEGDPLKIDQSALTGESLPVSKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIIEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDVDTVVLMAAQASRLENQDAIDTAIVGMLADPKEARIGIQEVHFLPFNPTDKRTALTYTDRDGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRTLAVAFQDVPDGKKESPGGPWQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESISALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWRFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTNFFPRVFGVSTLEKTAHDDFRKLASAIYLQVSTVSQALIFVTRSRGWSYVERPGILLVTAFVIAQLIATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDPIKFLIRYALSGRAWELVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQPPDTKMFTERTHFNELNQMAEEAKRRAEIARLRELHTLKGHVESVLKLKGIDVDTIQQAYTV 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02309 1032 NCBIfam HAD-IC family P-type ATPase 641 755 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g02309 1032 NCBIfam HAD-IC family P-type ATPase 179 427 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g02309 1032 FunFam ATPase 4 plasma membrane-type 651 897 - -
Spst9g02309 1032 NCBIfam plasma-membrane proton-efflux P-type ATPase 112 888 IPR006534 GO:0008553|GO:0016020|GO:0120029
Spst9g02309 1032 Gene3D - 172 897 - -
Spst9g02309 1032 SUPERFAMILY Calcium ATPase, transduction domain A 210 307 IPR008250 -
Spst9g02309 1032 Pfam E1-E2 ATPase 208 386 - -
Spst9g02309 1032 PANTHER CALCIUM-TRANSPORTING ATPASE 95 965 - -
Spst9g02309 1032 Gene3D - 404 703 IPR023214 -
Spst9g02309 1032 FunFam Plasma membrane ATPase 419 566 - -
Spst9g02309 1032 Gene3D - 419 566 IPR023299 GO:0000166
Spst9g02309 1032 SFLD Haloacid Dehalogenase 389 717 - -
Spst9g02309 1032 SUPERFAMILY Calcium ATPase, transmembrane domain M 93 929 IPR023298 -
Spst9g02309 1032 Coils Coil 983 1003 - -
Spst9g02309 1032 FunFam Plasma membrane ATPase 210 294 - -
Spst9g02309 1032 Gene3D - 981 1032 - -
Spst9g02309 1032 SFLD p-type atpase 389 717 IPR044492 -
Spst9g02309 1032 SMART Cation_ATPase_N_a_2 93 165 IPR004014 -
Spst9g02309 1032 Gene3D - 210 294 - -
Spst9g02309 1032 SUPERFAMILY HAD-like 403 713 IPR036412 -
Spst9g02309 1032 FunFam Plasma membrane ATPase 560 714 - -
Spst9g02309 1032 Pfam haloacid dehalogenase-like hydrolase 403 680 - -
Spst9g02309 1032 CDD P-type_ATPase_H 112 923 IPR006534 GO:0008553|GO:0016020|GO:0120029
Spst9g02309 1032 ProSitePatterns E1-E2 ATPases phosphorylation site. 409 415 IPR018303 -
Spst9g02309 1032 Pfam Cation transporter/ATPase, N-terminus 96 159 IPR004014 -
Spst9g02309 1032 PRINTS H+-transporting ATPase (proton pump) signature 638 654 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g02309 1032 PRINTS H+-transporting ATPase (proton pump) signature 666 682 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g02309 1032 PRINTS H+-transporting ATPase (proton pump) signature 842 863 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g02309 1032 PRINTS H+-transporting ATPase (proton pump) signature 697 722 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g02309 1032 PRINTS H+-transporting ATPase (proton pump) signature 523 541 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g02309 1032 PRINTS P-type cation-transporting ATPase superfamily signature 689 701 - -
Spst9g02309 1032 PRINTS P-type cation-transporting ATPase superfamily signature 583 593 - -
Spst9g02309 1032 PRINTS P-type cation-transporting ATPase superfamily signature 407 421 - -
Spst9g02309 1032 PRINTS P-type cation-transporting ATPase superfamily signature 561 572 - -
Spst9g02309 1032 PRINTS P-type cation-transporting ATPase superfamily signature 666 685 - -
Spst9g02309 1032 PRINTS P-type cation-transporting ATPase superfamily signature 257 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02309 Spst-Chr9 54147353 54154942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02309 77 1032 Primary Pumps ATPases AT5G62670 91.841 0.0 1786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02309 K01535 - gmx:100782459 1787.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04653 3 98356113 98365517 Spst9g02309 9 54147353 54154942 ECH
Spst9g02309 9 54147353 54154942 Spst9g02309 9 54147353 54154942 ECH