Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02302 ATGGAGTTTGCGAACTTCAGTCTCTATCTTAACTCGAAGTGGGTATCCACGGTGGCGAGCATATGGATTCAGTGCACCAGCGGGTCACTTTATACTTTCTCCATCTACTCTCAAACTCTAAAGTCCACTCAGCACTATGATCAATCAACCCTCGACCTTGTCTCCGTCTCCAAAGACATCGGAATTAACGCCGGCGTCGTCTCCGGCCTCCTCTACGACTTCCTTGCTCGAACAACCACAACAGGGCCCTGGATCGTCCACTTTTTGGGCTCGGCCCAATGCTTCTTGGGCTATTTTCTCATGTGGGCCGCTGTGGCCGGCCTCTTCCCGCCCGTCCCCGTCCCCGTCATGTGCCTCTTCATGTTCGTGGCAGCTCACGCGCAGAGCTTCTTCAACACCTCAAACGTCGTCACCGGCGTGCATAATTTTCCGCACAACACCGGAACCATTGTCGGCATTTTGAAGGGATTTCTTGGTCTAAGTGGAGCAATATTAATTCAAGTGTACAGAACAATATTCAACAACAAGCCTATGTCATATCTTCTGATGCTAGCACTCTTACCACCTCTAAATACTTTGCTGCTTATGTGGTTTGTAAGAATCCACAGCACTCGTGAGGATGAAGAAAGGAAGTATTTAAATATATTTTCTTTGATGGCTCTGGTTGTTGCTGCATACCTTATGGTTGATATAATCCTAGGGAACATATTTAGTCTGCAACCATTGGTGCGCATTGTTATATTTGTTGGTCTTTTGTTGTTGCTAGCCTCACTTATCTGCATTGCATTTAAAGCACATGAAAAGAGCTATGGTAGAAGAAGTTCAGAAAACTTGCTGGATGAGAGGTCACAACTAATTGCGGAGCCAAGCCCCCTGGATACTACTGAAAAGCTGGATGCAATGCAAGATTCTTCGAACAGTCAAAGGACTAATTTGCAACTAGGAGAAAACATGAATATTTTCCAAGCAGTGAAAACTGTGAACTTTTGGATTTTGTTTATTTCTATTGCTTGTGGTATGGGATCAGGACTTGCAACTGTTAATAATTTGGGCCAAATAGGGGAATCTCTTGGTTATACTAGCCATGAGACTAGTTCCTTAGTTTCTCTGTGGAGCATCTGGAATTTTCTTGGTCGCTTTGGAGCTGGTTATATGTCAGATTATTATTTGCACACAAGAGGATGGGCAAGACCTTTATTCATGGTCATCACTTTAATGATCATGAGCATTGGCCATGCTGTGATATCTTCTGGACTTCCAGGTTCCCTATATGCTGGTTCAGTATTGGTGGGTATTTGTTATGGCTCTCAGTGGTCCCTAATGCCCACAATCACTTCTGAGATATTTGGTGTTGGAAATATGGGTAGCATATTCAACACCATTAGTATAGCAAGTCCTGTGGGTTCGTATATATTCTCAGTCAGAGTAGTTGGATATGTATATGACAAAGAAGCATCCGAAGGAAATACATGCATTGGAACTCATTGTTTTATGATTTCATTTCTCATAATGGCATCTGCCACTATTCTGGGTTCTTTGACAGCTTTAGGTCTGTTTTTACGGACCAAAAATTTCTATGATCAGGTTATAGTCAGAAGAATTCAAAATATTCAGTGA 1617 0.4292 MEFANFSLYLNSKWVSTVASIWIQCTSGSLYTFSIYSQTLKSTQHYDQSTLDLVSVSKDIGINAGVVSGLLYDFLARTTTTGPWIVHFLGSAQCFLGYFLMWAAVAGLFPPVPVPVMCLFMFVAAHAQSFFNTSNVVTGVHNFPHNTGTIVGILKGFLGLSGAILIQVYRTIFNNKPMSYLLMLALLPPLNTLLLMWFVRIHSTREDEERKYLNIFSLMALVVAAYLMVDIILGNIFSLQPLVRIVIFVGLLLLLASLICIAFKAHEKSYGRRSSENLLDERSQLIAEPSPLDTTEKLDAMQDSSNSQRTNLQLGENMNIFQAVKTVNFWILFISIACGMGSGLATVNNLGQIGESLGYTSHETSSLVSLWSIWNFLGRFGAGYMSDYYLHTRGWARPLFMVITLMIMSIGHAVISSGLPGSLYAGSVLVGICYGSQWSLMPTITSEIFGVGNMGSIFNTISIASPVGSYIFSVRVVGYVYDKEASEGNTCIGTHCFMISFLIMASATILGSLTALGLFLRTKNFYDQVIVRRIQNIQ 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02302 538 Gene3D MFS general substrate transporter like domains 206 511 IPR036259 -
Spst9g02302 538 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 527 - -
Spst9g02302 538 Pfam Nodulin-like 13 262 IPR010658 -
Spst9g02302 538 Pfam Major Facilitator Superfamily 332 521 IPR011701 GO:0022857|GO:0055085
Spst9g02302 538 SUPERFAMILY MFS general substrate transporter 219 524 IPR036259 -
Spst9g02302 538 SUPERFAMILY MFS general substrate transporter 14 205 IPR036259 -
Spst9g02302 538 CDD MFS_Mch1p_like 12 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02302 Spst-Chr9 53935120 53937039 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02302 10 536 Nodulin-like Gene Family AT1G74780 55.390 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02302 - - gmx:100814668 893.649