Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02298 ATGAAACAGATGGCGAGGTCTCCTTGTGAAAAAGTCAATGTCAAAAGGGGTGTGTGGACTACAGAAGAAGATACAAAGAAACTCGCAGGCTCCAGGCATGGATCTGGACTCAAAAGGTGTGGAAAGAGTTGTAGGCTTAGGTGGAGTAACTGCCTCAGGCCTGATCTTAAGCTCGACAATTTCACAGTCCAAGAAGAAGATCTAATCATTAAGCTTCATGCAGCCATAGGTAGCAGGTGGTCTATAATAGCCCAGCAACTTCCTGGGAAAACAGACAATGATGTAAAGATCTACTGGAACACAAAGCTGAAAAAGAAGCTCTCTCAAATGGGGATTGACCATGTTACCCACAAGCCCTTTTCTAGACTCATTGCTGACTATGGAAACATTGGGGGTTGCCAGAAACCAACTAACCGAATAGGGTCTATCAATAAAGACTTCAAGAGTGCAATGATGCTAAAATCCGAACCCCATCAAACCATGCCACAAGGATTTACAAACATCAATGACCAACAAAAGCTACCACCCCAAATGGAAACCACTGGAAATAACTTTTTATTCAATAGAACTCATGGTGATAACCTCTCAATGGATCTTGCTCGGTTCCAATCCATCCCAATGGTGTCAGGTGCCTCAAATTGCATAGACTTTGAGAATGAGACCATCCAGGTATCTGTGTTTGGGGAAGATCGTTTGTCAAAAACTTCATCACCATCTACTCCTTCTACTTGTTCCACTTCAGCTTTTACTTGGAATGACTTCCTTCTAGAAGATGCTTGTACACCACTTGATTATCAGGAGCAAGACATCATGGTTTCAAAGGGCTTGCTGAGCCAAATAGAGAATGTGGTGACTAGACAGAGTTGGAATAAGAAAGAGGTTAAGTCACAACATCAAGCCTCAAGTAGTGACTTCAAATTTTCATCATCCTCTGACATTTCATTCATAGAAGCCATGCTTGATCAAGAAAATGAGATGTTTCTAAGTTTTCCACACCTTATGGAGGAACCATCCAACTTGAGTTAA 1026 0.4181 MKQMARSPCEKVNVKRGVWTTEEDTKKLAGSRHGSGLKRCGKSCRLRWSNCLRPDLKLDNFTVQEEDLIIKLHAAIGSRWSIIAQQLPGKTDNDVKIYWNTKLKKKLSQMGIDHVTHKPFSRLIADYGNIGGCQKPTNRIGSINKDFKSAMMLKSEPHQTMPQGFTNINDQQKLPPQMETTGNNFLFNRTHGDNLSMDLARFQSIPMVSGASNCIDFENETIQVSVFGEDRLSKTSSPSTPSTCSTSAFTWNDFLLEDACTPLDYQEQDIMVSKGLLSQIENVVTRQSWNKKEVKSQHQASSSDFKFSSSSDISFIEAMLDQENEMFLSFPHLMEEPSNLS 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02298 341 ProSiteProfiles Myb-like domain profile. 53 103 IPR001005 -
Spst9g02298 341 SUPERFAMILY Homeodomain-like 38 111 IPR009057 -
Spst9g02298 341 FunFam Os07g0634900 protein 60 119 - -
Spst9g02298 341 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 53 107 IPR017930 -
Spst9g02298 341 Pfam Myb-like DNA-binding domain 60 101 IPR001005 -
Spst9g02298 341 Gene3D - 59 121 - -
Spst9g02298 341 CDD SANT 60 103 IPR001005 -
Spst9g02298 341 PANTHER F14D16.11-RELATED 4 338 - -
Spst9g02298 341 SMART sant 57 105 IPR001005 -
Spst9g02298 341 SMART sant 15 54 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02298 Spst-Chr9 53810462 53812110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02298 4 336 MYB Transcription Factor Family AT3G28470 36.963 3.39e-52 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Spst9g02298 Myb_DNA-binding 5.3e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02298 K09422 - gmx:100795381 493.812