Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02286 ATGCCTCTCTCCTCCGTCGCTTCCCATTCCGACGCCTCCGATTCTGTTGCCTCCGGCGAGATCATGCTCTTTGGAGTCAGGGTAGTGGTGGACTCCATGAGGAAGAGCGTTAGCATGAATAACCTTTCCCAGTACGAGCATCCCCGCGATACCGCCGCCATCAAAGATGATGCCGGATACGCCTCCGCCGACGACGCTGCTCCGATCAACTCCGGCAAAAACCGCGACCGCAAGCGAGGGATTCCATGGACGGAGGAGGAACACAAGCTGTTCTTGGTGGGGTTGCAGAAAGTGGGGAAAGGTGACTGGAGAGGAATCTCAAGGAACTATGTCAAGACACGGACACCAACTCAGGTTGCTAGCCATGCGCAAAAATATTTTCTCCGCCGCGCCAACCTCAATCGCCGTCGACGTAGATCCAGCCTCTTTGACATCACCACCGAATCGGTAACTTGTGTTATGATAAAGTTTGATGTTACTTTTGTGGCATGGAATTGGGTGCTCTGA 507 0.5365 MPLSSVASHSDASDSVASGEIMLFGVRVVVDSMRKSVSMNNLSQYEHPRDTAAIKDDAGYASADDAAPINSGKNRDRKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRRANLNRRRRRSSLFDITTESVTCVMIKFDVTFVAWNWVL 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02286 168 Gene3D - 81 133 - -
Spst9g02286 168 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 131 IPR017930 -
Spst9g02286 168 ProSiteProfiles Myb-like domain profile. 75 127 IPR001005 -
Spst9g02286 168 NCBIfam myb-like DNA-binding domain, SHAQKYF class 78 129 IPR006447 GO:0003677
Spst9g02286 168 SUPERFAMILY Homeodomain-like 77 130 IPR009057 -
Spst9g02286 168 Pfam Myb-like DNA-binding domain 82 127 IPR001005 -
Spst9g02286 168 ProSiteProfiles SANT domain profile. 83 131 IPR017884 -
Spst9g02286 168 CDD SANT 82 127 IPR001005 -
Spst9g02286 168 SMART sant 79 129 IPR001005 -
Spst9g02286 168 FunFam transcription factor MYB1R1 81 132 - -
Spst9g02286 168 PANTHER TRANSCRIPTION FACTOR KUA1 17 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02286 Spst-Chr9 53635797 53636742 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Spst9g02286 Myb_DNA-binding 5.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02286 - - gmx:778056 234.572