Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02282 ATGTCAGCCTCCAGTCATGCAATTGAAAAGGCTGTGGTTGCCACAGCTGGGGCTATGTTACTCTTTGCAGCTGTTTTTGTTTACTTTTTTCACAAATTTGTGCTTGCTAGATACCACCAGAGACACAAAATTGGAGCAAGTTTGCTTCGAGAATCTGGAGTGAACCTTGAGTATATAAACAAAGTTGGTGGCAATGTGAAGGGATTAATTGTTGAAGAAAATGGGGTTGATGTTCTTTATGTGATGGACACAGAAAGAAGACCATTGATAACTGGATTCCAAAATAGTATACTTAATCCAAGTTATGAACATGATGAAGAAGAAAAGAGAATAGATATAATGGTCCAAAGGTCCAAAGTATCCAAGCCTGAAATTCCACAGGCATGTGAATCTCCAAGCTTGGTTGGTCAAGAGAATCAAGTTAAGCCAGAATCACACACACCATCATTTTCAACATCACTAACACCAAGACAGAACTTGCCACAATCACCTCAGCTAGCACCTCCACTCCAACCACCACCACAATCTCCACCAATCATAATTGAGAACAAGAAAACCCAACCACCACCACCTCCTCCTCCTCCAACTCGTCCTCCACCACCACCACCTGGTCCACCTCCTCTTCCAAAGGCCAGTGGCTTCATTTCATCACTGAAACCCCCACCTTCACCCAAAGGGAAAACAAACATAAGGAGCACTAAAGAGGGTATGACAGGGGAGAGTTCAAGAGAGAAGGGTGTTGGTCAGACAAGACTGAAGCCTCTACACTGGGACAAGGTTGTAGCAAATGTTGATCATTCAACAGTGTGGGATCAGATCAATGATGGCTCTTTCCGGTTTGATGATGAACTAATGGAATCACTCTTTGGATATTCAAGTAGCTATAAAACGCAAGAAAGAAACAGAATTCTTTCCACTATGGCTAAGTCCAATTCCAATGCACCAGCTCAAATATTTATTCTTGACCCAAGGAAATCTCAAAACACTGCAATTGTGCTAAGATCACTTGCCATTTCTCGCAAGGGAATCTTGGATGCAGTTCTTGATGGTCAGGGTCTAAGTGTTGAGACACTTGAAAGACTCACTAAAATAGCTCCAACCCAAGAAGAGGAAGCCAAAATCATCCAATTCAGTGGCAACCCGGATCAGCTCGCTGATGCTGAGTCTTTCCTGTACTACATCCTTACAGCAGTTCCAACAGCATTCAACCGTTTGAAAGCAATGCTGTTCAGGTCGAGTTATGATTGTGAAGTTCTTCAGCACAAGGAACAGCTACAAACACTTGAAATGGGTTGCAAGGAACTGAGAACTAGTGGTCTGTTTCTGAAACTCCTTGAAGCCATTCTCAAGGCTGGGAACCGGATGAATGCTGGAACCTCAAGAGGCAATGCACAAGGTTTCAACCTCAGTGCTCTTAGAAAACTTTCTGATGTGAAAAGCACAGATGGGAAGACTAGCTTGCTTCATTTTATAGTAGAACAAGTGGTTCAGTCAGAAGGAAGAAGACAAGTTCTCTATCAAAAGCACAAACTTCACATGAGCAATGTTGAAACAAGCAATGTAAAAAAACCTTATTCATATAGCCTGACACAACAAGAGGCAGATAAAGAATACACAATGCTTGGTCTGCAAGTGCTAGGTGGGCTAAGAGATGAGTTATCTGAAGCAAAGAAAGCAGCCAGTATTGAGTATCACAATTTCATCACAATGTGTACCGCTCTCAATGCTCATGCTAGTGAAATTAAACAGATTATAACATGTTGTGGCAATACCAGGAGTGGTGGATTTATCAACGAAATGAAAGGGTTCCTAGAGGAATGTGAGGGAGAACTTGAGGTGGTGAAAGAGGAGCAGACAAGGATCATGGAGCTTGTGAAAAAAACAAACGATTACTATCTAGCAGGAGCATCCAAAGACAACATGGTAAACCCCTTTCAACTGTTTGATATTGTAAAGAATTTTGTTGACATGGTAGATCAGGCTTGCATAGAACTAAAAAGGAAGGTAGAAAAGAAGAATTTGGGAGGAGAAGCTGCCTCAACAACACCACCTTTGTCACCATCAAAGAGGGCACCACTGAGATTCCCTAACTTCGATTTGTATTTTCTGTCCAATGTTTCAGAAACTTCATCTTCTAGCCAATCAGAAGATGATTTCTGA 2160 0.419 MSASSHAIEKAVVATAGAMLLFAAVFVYFFHKFVLARYHQRHKIGASLLRESGVNLEYINKVGGNVKGLIVEENGVDVLYVMDTERRPLITGFQNSILNPSYEHDEEEKRIDIMVQRSKVSKPEIPQACESPSLVGQENQVKPESHTPSFSTSLTPRQNLPQSPQLAPPLQPPPQSPPIIIENKKTQPPPPPPPPTRPPPPPPGPPPLPKASGFISSLKPPPSPKGKTNIRSTKEGMTGESSREKGVGQTRLKPLHWDKVVANVDHSTVWDQINDGSFRFDDELMESLFGYSSSYKTQERNRILSTMAKSNSNAPAQIFILDPRKSQNTAIVLRSLAISRKGILDAVLDGQGLSVETLERLTKIAPTQEEEAKIIQFSGNPDQLADAESFLYYILTAVPTAFNRLKAMLFRSSYDCEVLQHKEQLQTLEMGCKELRTSGLFLKLLEAILKAGNRMNAGTSRGNAQGFNLSALRKLSDVKSTDGKTSLLHFIVEQVVQSEGRRQVLYQKHKLHMSNVETSNVKKPYSYSLTQQEADKEYTMLGLQVLGGLRDELSEAKKAASIEYHNFITMCTALNAHASEIKQIITCCGNTRSGGFINEMKGFLEECEGELEVVKEEQTRIMELVKKTNDYYLAGASKDNMVNPFQLFDIVKNFVDMVDQACIELKRKVEKKNLGGEAASTTPPLSPSKRAPLRFPNFDLYFLSNVSETSSSSQSEDDF 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02282 719 SMART it6_source 244 673 IPR015425 -
Spst9g02282 719 MobiDBLite consensus disorder prediction 222 236 - -
Spst9g02282 719 MobiDBLite consensus disorder prediction 162 210 - -
Spst9g02282 719 Gene3D Formin, FH2 domain 264 681 IPR042201 -
Spst9g02282 719 SUPERFAMILY Formin homology 2 domain (FH2 domain) 190 672 - -
Spst9g02282 719 MobiDBLite consensus disorder prediction 122 251 - -
Spst9g02282 719 MobiDBLite consensus disorder prediction 237 251 - -
Spst9g02282 719 PANTHER FORMIN-RELATED 4 698 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Spst9g02282 719 ProSiteProfiles Formin homology-2 (FH2) domain profile. 242 684 IPR015425 -
Spst9g02282 719 MobiDBLite consensus disorder prediction 132 161 - -
Spst9g02282 719 Pfam Formin Homology 2 Domain 249 658 IPR015425 -
Spst9g02282 719 Coils Coil 597 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02282 Spst-Chr9 53528323 53530635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02282 8 717 FH2 protein (formin) Gene Family AT1G70140 40.486 1.57e-157 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02282 - - gsj:114409782 1182.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02499 3 72811263 72813707 Spst9g02282 9 53528323 53530635 ECH
Spst9g02282 9 53528323 53530635 Spst9g02282 9 53528323 53530635 ECH