Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02281 ATGGCTGCCGCCGGTGATGTTTTCAGGCAGGGCTTGCCGGAAGTGGGTGCCGGGAAGCTGCATGTGCTTGCTGTTGATGACAGCCACGTGGACCGCAAGGTCATTGAACGGTTGCTCAAAATCTCGTCTTGCAAAGTGACGGTGGTGGAAAGTGGAAGCCGCGCTCTGCAGTATCTGGGATTGGATGGAGAGAAAAGCTCTATTGGTTTTGATACGGTCAAGGTTAATTTGATAATGACAGATTACTCCATGCCGGGGATGACAGGATATGAACTGCTCAAGAAGATAAAGGAATCATCTGTTTTTAGAGAGGTTCCAGTGGTGGTTATGTCGTCTGAGAATATATTGACCCGAATTGATAGTTGTTTGGAGGAGGGAGCAGAAGAGTTTCTGTTGAAACCTGTGAAGTTGTCAGATGTAAAACGCGTGACAGATTTCATCATGAGAGGTGAAGGGAAGAAAGGAGTAGAAAAATCTCACAAGAGAAGAAGATCAGATGATTGCACCCCTCCATCACCTTCTGCATTGCACTCAAAGAAGTCCAGATTGAGCATATAG 558 0.4642 MAAAGDVFRQGLPEVGAGKLHVLAVDDSHVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEKSSIGFDTVKVNLIMTDYSMPGMTGYELLKKIKESSVFREVPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSDVKRVTDFIMRGEGKKGVEKSHKRRRSDDCTPPSPSALHSKKSRLSI 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02281 185 Gene3D - 19 183 - -
Spst9g02281 185 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 160 IPR045279 GO:0009736
Spst9g02281 185 CDD REC_typeA_ARR 22 143 - -
Spst9g02281 185 MobiDBLite consensus disorder prediction 152 168 - -
Spst9g02281 185 ProSiteProfiles Response regulatory domain profile. 21 148 IPR001789 GO:0000160
Spst9g02281 185 MobiDBLite consensus disorder prediction 171 185 - -
Spst9g02281 185 MobiDBLite consensus disorder prediction 152 185 - -
Spst9g02281 185 SUPERFAMILY CheY-like 19 148 IPR011006 -
Spst9g02281 185 SMART REC_2 20 144 IPR001789 GO:0000160
Spst9g02281 185 Pfam Response regulator receiver domain 22 141 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02281 Spst-Chr9 53519564 53521357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02281 20 180 Response Regulator Gene Family AT5G62920 70.807 3.44e-76 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Spst9g02281 Response_reg 5.1e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02281 K14492 - gmx:100306152 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02500 3 72872766 72873856 Spst9g02281 9 53519564 53521357 ECH
Spst9g02281 9 53519564 53521357 Spst9g02281 9 53519564 53521357 ECH