Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Spst9g02241 | ATGGTGGCTAGGTCATGCTTGAATTTGTTAGACCTGGTATCAGGGGATATGCTGAATTTCCCTCAAACTCCAAGATCTCTTCCGCGAGTTATGACTGATCCAGTAATATATTCTGATGGAGATGGTAAACAAAGTAATGATGATGATTCAAGTGTTTTCTCAACTGAACACCGTCGCAAGATAATTATAGTGTCAAATTCTCTTCCTCTCAATGCGAAAAGGGATAAAGTATCTGGTAGATGGTGCTTCAGTTATGATGAGGATTCTATTTTTTGGCAGTTAAAGGATGGTCTCTCTCCTGATGCTGATGTTGTGTATGTGGGATCTCTGAAGGTTGATGTTGATGCAAGCGAGCAAGATAAAGTTTCCCTTCAGTTGCTGGAGGAATTCAACTGCTTGCCTACTTTTATTCCTTCAGAACTCTACAAACAATTCCATGATGGATTCTGCAAGCAACATTTGTGGCCTCTATTCCATTACATGTTGCCCATGTATCCAGGCAATCGTCGCTTTGATAGATCACAGTGGCAGGCTTATGTTTCTGCTAACAAGATATTTGCAGATAAAGTCATGGAGGTCCTTAATCCAGAAGATGATTATGTATGGGTTCATGATTATCATCTTATGGTGCTTCCAACATTTCTGCGGAAGCGGTGTAGTCGAGTCAAGCTTGGCTTTTTCCTCCACAGTCCATTTCCTTCATCAGAAATTTATAAAACTCTGCCTGTCAGAGGTGACATTTTGAAAGCACTGCTTAACGCAGATTTAGTTGGTTTTCACACCTTTGATTATGCTCGCCATTTTCTCTCCTGCTGCAGGCGAATGCTAGGCTTGGAACACGAATCCAAGAGGGGTTACATTGGGCTTGAATACTCTGGCCGCACAATATTCATTAAAATTTTGCCTGCTGGGATTCACATGGGTCGACTTCAATCTGCCTTAGATCACCCTTCCTCTTCTAACAAAGTCAGAGAAATCCACGAACAATTTAAGGAGAAAAAGCTTATTCTTGGTGTTGATGATATGGACATATTCAAAGGTGTCAGTTTAAAATTTCTGGCCATAGAACAACTCCTCCAGCAATATCCAGAAATGCAAGGTAAATTGATACTGATCCAAATTTTAAACCCCCCAAGTAGTGCTGACAAAGATATTGAGGATGCAAAGGAGGAAGCCTACATTACTGCCAAAAAGATAAATGAAAGGTTTGGTTTGGAAGGTTATGAACCTATCATCATCATTGATCGCCATGTTCCTTACTATGAGAAGGCAGCCTATTATGCTTTGGCAGAATGTTGCATTGTGAATGCAGTTCGCGATGGTTTGAATTTGGTTCCCTACAAGTACACTGTTTGTAGGCAGGGAAGTTCTAAAATGGATGAAGCCTTGGGAATTGCTCCTGACTCTCCGCGTGCAAGTGCACTTGTTGTTTCTGAGTTTATCGGTTGCTCACCATCTCTTAGTGGCGCAATAAGGGTAAATCCATGGGATATTGATGCAGTAGCTGAAGCACTAAATTTGGCAATCACAATGCCTGATGGAGAGAAGCAGCTTCGACATGAGAAGCACTATAGATACGTTAGTTCTCATGATGTGGCCTACTGGGCTCGAAGTTTTGAGCAAGATCTAGTGTTTTCGTGCAAGGATCACTCTAGGAACCGTTGCTGGGGCATTGGCTTTGGCCTGAACTTCAGAATTTTATCTCTCTCTCCTAGTTTCAGGAGGCTATCCATAGACCACGTTGTCCCTGCATATAAAAGGAGCAGTTGCAGGGCAATCCTTTTGGATTATGATGGTACAGTTGTACCTCAAGCATCCATTGATAAAGCCCCCAATCCTGAAGTCATATCGGTGCTAAATAACCTTTGCAGTGATGTCAACAACACTGTGTTTATTGTTAGTGGCAGGGGAAAAACATCATTGAGTGAATGGTTTGATCAGTGTGAGAATCTTGGTATAGCAGCTGAGCATGGTTATTTTATAAGGTTAGTGATTTATAGTTGGTGGGGTAAGCATGCTAGTTGGCAAATGAGTCATGCAGATACAGATTTTGCGTGGAAAAGGATTGCTGAGCCTGTGTTGAGATCTTATATGGAGGCCACTGACGGCTCCTCTGTAGAGACCAAAGAGAGTGCCTTGGTATGGCATTACCATGATGCCGATCCTGATTTTGGATCTTGGCAAGCCATGGAGCTGTTGGATCACCTTGAAAATGTACTTGCAAATGAGCCTGTTGTTGTAAAAAAGGGACAACATATTATCGAAGTCAAGCCTCAGGGCATTACTAAAGGGTTAGTTGCACAGGAAGTTCTTTCTAGCCTATCCAAGAAGGGTAAATCGCCAGATTTTGTACTGTGCATTGGTGATGATAGGTCTGATGAGGATATGTTTGAGAGTATTTTAAGCAAACCTTACAGTGCTACTTCCTCCTCAGTACCAGAAATCTTTGCATGCACTGTTGGACAAAAACCAAGCAAAGCTAGATATTACCTAGATGACACCAAGGATGTGATGTCATTACTTGAGGGTCTTGGTGCTGCTTCAGTGCCTAAATCAAGATATTCTACAGAAACCCCTTTTGAGAAAAGAGAAGTATGTTTTGAGAATATCGTTTAG | 2616 | 0.4182 | MVARSCLNLLDLVSGDMLNFPQTPRSLPRVMTDPVIYSDGDGKQSNDDDSSVFSTEHRRKIIIVSNSLPLNAKRDKVSGRWCFSYDEDSIFWQLKDGLSPDADVVYVGSLKVDVDASEQDKVSLQLLEEFNCLPTFIPSELYKQFHDGFCKQHLWPLFHYMLPMYPGNRRFDRSQWQAYVSANKIFADKVMEVLNPEDDYVWVHDYHLMVLPTFLRKRCSRVKLGFFLHSPFPSSEIYKTLPVRGDILKALLNADLVGFHTFDYARHFLSCCRRMLGLEHESKRGYIGLEYSGRTIFIKILPAGIHMGRLQSALDHPSSSNKVREIHEQFKEKKLILGVDDMDIFKGVSLKFLAIEQLLQQYPEMQGKLILIQILNPPSSADKDIEDAKEEAYITAKKINERFGLEGYEPIIIIDRHVPYYEKAAYYALAECCIVNAVRDGLNLVPYKYTVCRQGSSKMDEALGIAPDSPRASALVVSEFIGCSPSLSGAIRVNPWDIDAVAEALNLAITMPDGEKQLRHEKHYRYVSSHDVAYWARSFEQDLVFSCKDHSRNRCWGIGFGLNFRILSLSPSFRRLSIDHVVPAYKRSSCRAILLDYDGTVVPQASIDKAPNPEVISVLNNLCSDVNNTVFIVSGRGKTSLSEWFDQCENLGIAAEHGYFIRLVIYSWWGKHASWQMSHADTDFAWKRIAEPVLRSYMEATDGSSVETKESALVWHYHDADPDFGSWQAMELLDHLENVLANEPVVVKKGQHIIEVKPQGITKGLVAQEVLSSLSKKGKSPDFVLCIGDDRSDEDMFESILSKPYSATSSSVPEIFACTVGQKPSKARYYLDDTKDVMSLLEGLGAASVPKSRYSTETPFEKREVCFENIV | 871 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Spst9g02241 | 871 | Pfam | Glycosyltransferase family 20 | 60 | 543 | IPR001830 | GO:0003824|GO:0005992 | |
| Spst9g02241 | 871 | CDD | HAD_TPP | 592 | 838 | - | - | |
| Spst9g02241 | 871 | FunFam | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 726 | 857 | - | - | |
| Spst9g02241 | 871 | NCBIfam | HAD-IIB family hydrolase | 593 | 798 | IPR006379 | - | |
| Spst9g02241 | 871 | Gene3D | - | 680 | 759 | - | - | |
| Spst9g02241 | 871 | MobiDBLite | consensus disorder prediction | 31 | 51 | - | - | |
| Spst9g02241 | 871 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 53 | 311 | - | - | |
| Spst9g02241 | 871 | Gene3D | Glycogen Phosphorylase B; | 312 | 528 | - | - | |
| Spst9g02241 | 871 | Gene3D | Glycogen Phosphorylase B; | 51 | 311 | - | - | |
| Spst9g02241 | 871 | NCBIfam | trehalose-phosphatase | 591 | 843 | IPR003337 | GO:0003824|GO:0005992 |
Showing 1 to 10 of 19 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Spst9g02241 | K16055 | - | gmx:100812031 | 1647.1 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Spst3g02536 | 3 | 73430420 | 73433210 | Spst9g02241 | 9 | 51059024 | 51062088 | ECH | |
| Spst9g02241 | 9 | 51059024 | 51062088 | Spst9g02241 | 9 | 51059024 | 51062088 | ECH | |
| Spst3g04590 | 3 | 97688389 | 97693787 | Spst9g02241 | 9 | 51059024 | 51062088 | PCT |
Showing 1 to 3 of 3 entries