Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02237 ATGGTGGTACCAAATCTTGGACCCTCGATCGAAGTTCGTGGCGAAATGGAACCGCACGTTCCTCTACGTGTGCATCGTGGCGTTGTTCCTGGACCCTCTCTACTTCTATTTCCCCATCACGGGGACAAGGCCTGCATGCAAACCGACATCGTCCTCGGAGTCTTCGTCACGTTCTCGCGCACCGTCGCCGACCTTTTCTTCCTTTTCCACATGGTGCTCAAGTTTCGCACCGCCTATATCTCCCCCACCTCTCGCGTTTATGGCCGCAAAGAACTCGTCACCGACCCTCGCGATATAGCCTCGCGCTACCTCAAGTCCGATTTCATTATCGATCTCCTCGCCACCCTTCCTCCGCCTCGGGTAATTACTCCTTTTCCCCTCTTCATCGTTCACTCTGCTATTTAG 405 0.5432 MVVPNLGPSIEVRGEMEPHVPLRVHRGVVPGPSLLLFPHHGDKACMQTDIVLGVFVTFSRTVADLFFLFHMVLKFRTAYISPTSRVYGRKELVTDPRDIASRYLKSDFIIDLLATLPPPRVITPFPLFIVHSAI 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02237 134 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 38 125 - -
Spst9g02237 134 Pfam Ion transport protein 54 117 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Spst9g02237 134 SUPERFAMILY Voltage-gated potassium channels 48 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02237 Spst-Chr9 50822100 50822504 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02237 41 133 Ion Channels AT2G24610 56.989 2.64e-32 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02237 K05391 - gmx:100783672 152.14