Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02236 ATGAGCAGCGATTTCTATCGATTCGCAGTTTCATCCCACTTCAGCAGTTTCCCGAAATCCTTCTCTCTGCGAAAGAAAGTGCCATGGTGGTACCAAATCTTGGACCCTCGATCGAAGTTCGTGGCGAAATGGAACCGCACGTTCCTCTACGTGTGCATCGTGGCGTTGTTCCTGGACCCTCTCTACTTCTATTTCCCCATCACGGGGGACAAGGCCTGCATGCAAACCGACATCGTCCTCAGAGTCTTCGTCACGTTCTTGCGCACCGTCGCCGACCTTTTCTTCCTTTTCCACATGGTGCTCAAGTTTCGCACCGCCTATATCTCCCCCACCTCTCGCGTTTATGGCCGCAAAGAACTCGTCACCGACCCTCGCGATATAGCCTCGCGCTACCTCAAGTCCGATTTCATTATCGATCTCCTCGCCACCCTTCCTCCGCCTCGGTTTCAAAATCATGTTGCTGTTGTAATGCAAATTGCAACATGA 486 0.5206 MSSDFYRFAVSSHFSSFPKSFSLRKKVPWWYQILDPRSKFVAKWNRTFLYVCIVALFLDPLYFYFPITGDKACMQTDIVLRVFVTFLRTVADLFFLFHMVLKFRTAYISPTSRVYGRKELVTDPRDIASRYLKSDFIIDLLATLPPPRFQNHVAVVMQIAT 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02236 161 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 25 155 - -
Spst9g02236 161 Pfam Ion transport protein 44 145 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Spst9g02236 161 SUPERFAMILY Voltage-gated potassium channels 35 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02236 Spst-Chr9 50815960 50816583 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02236 12 148 Ion Channels AT2G24610 50.714 1.09e-42 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02236 K05391 - gmx:100783672 278.1