Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02235 ATGAGCAGCGATTTCTATCGATTCGCAGTTTCATCCCACTTCAGCAGTTTCCCGAAATCCTTCTCTCTGCGAAAGAAAGTGCCATGGTGGTACCAAATCTTGGACCCTCGATCGAAGTTCGTGGCGAAATGGAACCGCACGTTCCTCTACGTGTGCATCGTGGCGTTGTTCCTGGACCCTCTCTACTTCTATTTCCCCATCACGGGGGACAAGGCCTGCATGCAAACCGACATCGTCCTCGGAGTCTTCGTCACGTTCTCGCGCACCGTCGCCGACCTTTTCTTCCTTTTCCACATGGTGCTCAAGTTTCGCACCGCCTATATCTCCCCCACCTCTCGCGTTTATGGCCGCAAAGAACTCGTCACCGACCCTCGCGATATAGCCTCGCGCTACCTCAAGTCTGATTTCATTATCGATCTCCTCGCCACCCTTCCTCTGCCTCAGTTTCAAAATCATGTTGCTGTTGTAATGCAAATTGCAACATGA 486 0.5185 MSSDFYRFAVSSHFSSFPKSFSLRKKVPWWYQILDPRSKFVAKWNRTFLYVCIVALFLDPLYFYFPITGDKACMQTDIVLGVFVTFSRTVADLFFLFHMVLKFRTAYISPTSRVYGRKELVTDPRDIASRYLKSDFIIDLLATLPLPQFQNHVAVVMQIAT 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02235 161 Pfam Ion transport protein 44 148 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Spst9g02235 161 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 25 156 - -
Spst9g02235 161 SUPERFAMILY Voltage-gated potassium channels 35 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02235 Spst-Chr9 50803625 50804248 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02235 12 148 Ion Channels AT2G24610 52.857 3.56e-45 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02235 K05391 - gmx:100783672 287.73