Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02234 ATGAGCAGCGATTTCTATCGATTCGCAGTTTCATCCCACTTCAGCAGTTTCCCGAAATCCTTCTCTCTGCGAAAGAAAGTGCCATGGTGGTACCAAATCTTGGACCCTCGATCGAAGTTCGTGGCGAAATGGAACCGCACGTTCCTCTACGTGTGCATCGTGGCGTTGTTCCTGGACCCTCTCTACTTCTATTTCCCCATCACGGGGGACAAGGCCTGCATGCAAACTGACATCATCCTCGGAGTCTTCGTCACGTTCTCGCGCACCGTCACCGACCTTTTCTTCCTTTTCCACATGGTGCTCAAGTTTCGCACCGCCTATATCTCCCCCACCTCTCGCGTTTATGGCCGCAAAGAACTCGTCACCGACCCTCGCGATATAGCCTCGCGCTACCTCAAGTCCGATTTCATTATCGATCTCCTCGCCACCCTTCCTCTCGCCTCGGGAGCTCTTCACTCATTATTCACCCAGCTGATTGGATTGAGATTTCCTTTTCGAATCTTCTCCATCCGAATGAAGTTGTCGAACCGCCACCATCGAGAAGAATGCGCACTGGTGGTGCCTGCAATCGACCCAAAAAAGAAGAAAAGAAAGAGCAACCATGAGCAGCGATTTCTATCGATTCGCAGTTTCATCCCACTTCAGCAGTTTCCCGAAATCCTTCTCTCTGCGAAAGAAAGTGCCATGGTGGTACCAAATCTTGGACCCTCGATCGAAGTTCGTGGCGAAATGGAACCGCACGTTCCTCTACGTGTGCATCGCGGCGCTGTTCCTGGATCCTCTCTACTTCTATTTCCCCATCACGGGGACAAGGCCTCGCATGCAAACCGACATCGTCCTCTGAGTCTTCGTCACGTTCTCGCGCACCGTCGCCGACCTTTTCTTCCTTTTCCACATGGTGCTCAAGTTTCGCACCGCCTATATCTCCCCCACCTCTCGCGTTTATGGCCGCAAAGAACTCGTCACCGACCCTCGCGATATAGCCTCGCGCTACCTCAAGTCCGATTTCATTATCGATCTCCTCGCCACCCTTCCTCTCGCCTCAGTTTCAAAATCATGTCTGCCGTTATAGTGGTGTGGTTCGTGATTCCGGCGGTGAAAGATTCTACGGTGGCTCATGTAAACCACACCTTGTCCTTGATTGTTCTCATTCAGTTTATTCCGAGGTTGTTTCAGATTTTTCCTCTGCAACGGAGAATCTTGAAGACTAGTGGACTTATTGCCAAAACTGCCTTGGCAGGAGCTGTATACAATCTTGGTTCCTACATGCTTGCCAGCCATGTTTTAGGAGCTACCTGGTACGTGGCATCAATTCAGAGGCAGTACGAGTGTTGGATAATAACATGCAGAAGGGAGATGAACAGAACGCACTCTCCAACTTGTAGCCCTTCGTTTCTGGACTGTGCTACCCTCGAAAACCATGAAAGGCAATCATGGTTCAAACGCACCAGAGTTCTAAGTGATTGTGACGCCCTCAATGACAAAAACGAGTTTCAGTTTGGACTCTTCGCCGATGCTTTTACTGATCACGTTTCTTCATCAAGATTCATCCAAAAATACTTTTACTGCCTCTGGTGGGGTTTGAAGAATCTAAGTTCATACGGACAAAATCTTCAGGCTAGCACTTACAGTGGTGAAACATTGTTTTGTAGTTTCATATGCATCGCAGGTCTAATCCTGTTCGCGCATCTCATTGGCAACATGCAGAATTATCTGCAATCTACAACTGCCAGAGTTGAAGAGTGGAGACTTAAACAAAAAGATACAGAAGAGTGGATGAATCACCGGCAGCTTCCACCAGAACTACAACAACGTGTTCGGAGGTTTGTTCAATACCAATGGCTGGCCACTAGAGGAGTAGACGAAGAAGCCATTTTGCGTGCTTTGCCTCTGGACCTTCGCCGCCAGATTCAGAGGCATCTCTGTCTTGACATTATTCGTCGGGTTCCATTTTTCGGGCAAATGGATGACCAGCTTCTGGACGCAATATGCGAGCGCCTGGTATCGTCGCTGAACACGAAGGATACATACATCGCGCGCGAAGGAGATCCGGTGAGGGAGATGCTGTTCATCATTAGAGGGGAGGTGGAGAGCGCCACCACCGACGGCGGAAGAACAGGATTCTACAACTCAATCACACTCCGGCCCGGTGACTTCTGTGGCGAGGAGTTGCTCACGTGGGCTCTCATGCCCGCCTCCAGCCTCAACCTCCCGTCCTCCACTCGCACCGTGAAGACCATAACCGAAGTCGAGGCCTTCGCGCTCCGCGCCGACGACCTCAAGTTCGTGGCCAGCCAGTTCAAGCGCCTCCACAGCAAGAAGCTGCAGCACGCCTTCCGCTACTACTCCCACCAGTGGCGGGCCTGGGGGGCCCACTTCATTCAGGCCGCGTGGCGCCGCCACCGCAAGAGGAAACTGACCATGGAGCTTCTAGAGAAGGAGAGCTTGTACAATGTGACGGACATAGAAGATGATGATGATGATGATGTTGTTGTTGTTGAAGGAGGTGGTGCAGGTGAGAGTTCCAGTAGACACAGTTTGGGGCATTTTCAAAATCTTGGGGCTACCGTTTTTGCTTCTAAGTTCGCTGCAAACACCAGAAAAGGAGTGTTAAAGAAGATCAAAATTAAACTTCCTGATGCTGATAGTTTGAAGATGCCCAAGATGTTCAAGCCAACAGAACCCGATTTCTCGACTTTCCATGACTAA 2709 0.5042 MSSDFYRFAVSSHFSSFPKSFSLRKKVPWWYQILDPRSKFVAKWNRTFLYVCIVALFLDPLYFYFPITGDKACMQTDIILGVFVTFSRTVTDLFFLFHMVLKFRTAYISPTSRVYGRKELVTDPRDIASRYLKSDFIIDLLATLPLASGALHSLFTQLIGLRFPFRIFSIRMKLSNRHHREECALVVPAIDPKKKKRKSNHEQRFLSIRSFIPLQQFPEILLSAKESAMVVPNLGPSIEVRGEMEPHVPLRVHRGAVPGSSLLLFPHHGDKASHANRHRPLSLRHVLAHRRRPFLPFPHGAQVSHRLYLPHLSRLWPQRTRHRPSRYSLALPQVRFHYRSPRHPSSRLSFKIMSAVIVVWFVIPAVKDSTVAHVNHTLSLIVLIQFIPRLFQIFPLQRRILKTSGLIAKTALAGAVYNLGSYMLASHVLGATWYVASIQRQYECWIITCRREMNRTHSPTCSPSFLDCATLENHERQSWFKRTRVLSDCDALNDKNEFQFGLFADAFTDHVSSSRFIQKYFYCLWWGLKNLSSYGQNLQASTYSGETLFCSFICIAGLILFAHLIGNMQNYLQSTTARVEEWRLKQKDTEEWMNHRQLPPELQQRVRRFVQYQWLATRGVDEEAILRALPLDLRRQIQRHLCLDIIRRVPFFGQMDDQLLDAICERLVSSLNTKDTYIAREGDPVREMLFIIRGEVESATTDGGRTGFYNSITLRPGDFCGEELLTWALMPASSLNLPSSTRTVKTITEVEAFALRADDLKFVASQFKRLHSKKLQHAFRYYSHQWRAWGAHFIQAAWRRHRKRKLTMELLEKESLYNVTDIEDDDDDDVVVVEGGGAGESSSRHSLGHFQNLGATVFASKFAANTRKGVLKKIKIKLPDADSLKMPKMFKPTEPDFSTFHD 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02234 902 SUPERFAMILY cAMP-binding domain-like 580 776 IPR018490 -
Spst9g02234 902 Gene3D - 323 575 - -
Spst9g02234 902 Gene3D Helix hairpin bin 577 642 - -
Spst9g02234 902 Pfam Ion transport protein 353 579 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Spst9g02234 902 Pfam Ion transport protein 44 150 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Spst9g02234 902 Gene3D Jelly Rolls 649 769 IPR014710 -
Spst9g02234 902 SUPERFAMILY Voltage-gated potassium channels 35 168 - -
Spst9g02234 902 CDD CAP_ED 651 782 IPR000595 -
Spst9g02234 902 SMART cnmp_10 651 782 IPR000595 -
Spst9g02234 902 FunFam Cyclic nucleotide-gated ion channel 1 649 767 - -
Spst9g02234 902 SUPERFAMILY Voltage-gated potassium channels 387 614 - -
Spst9g02234 902 ProSiteProfiles cAMP/cGMP binding motif profile. 651 781 IPR000595 -
Spst9g02234 902 Pfam Cyclic nucleotide-binding domain 674 762 IPR000595 -
Spst9g02234 902 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 359 897 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02234 Spst-Chr9 50784921 50795112 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02234 357 897 Ion Channels AT3G48010 67.395 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02234 K05391 - gmx:100785326 982.245