Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02197 ATGCAGGTTGTGAAGATGGGTTTCCGTTACTTTGATCACTGTACTTCTATGGAAGAAACATTTGTTCCCTTTCGTGGGATTAAAAATGACCTCAAAGCAAGAATTGCATGCTACAGACAAGACTGGACCAGTGGATTCCAAGCAGGAATCAGGATCCTTGCTCCAACTACATACATATTTTTTGCTTCTGCAATTCCTGTTATTTCCTTTGGCGAGCAACTCGAGAGAAATACTGATGGATCTCTCACTGCTGTGCAAACTCTTGCATCAACAGCACTCTGTGGTATTATCCACTCAATCATTGGAGGCCAGCCTCTGCTCATACTCGGTGTAGCTGAGCCAACAGTTCTGATGTATACATTCATGTATAACTTTGCTAAGGATCGCAAGGATTTGGGACACAAACTATTCCTACCTTGGACTGGATGGGTGTGTGCTTGGACTGCACTGTTGCTCTTCTTGCTGGCCATTCTTGGCGCATGCTCCATAATCAATAGATTCACACGCATTGCTGGTGAGCTATTTGGTCTTCTAATTGCAATGCTCTTTATGCAGCAGGCTATAAAGGGACTCGTGGAAGAGTTTGGTGCTCCCAAGAACAAGGGAGAAGGCATCAATCAAATTGCTCTTCAATCATCTTGGCTGTTTGGCAATGGAATGTTTGCTTTGGTTTTGTCATTTGGTCTTCTTTTTACTGGTCTACAAAGCCGCAAAGCTAGATCCTGGTGTTACGGGACAGGTTGGCTACGGGGATTTATAGCTGATTATGGAGTCCCTCTAATGGTTCTGATATGGACTGCTGTGTCTTACATACCGGTCAATAAGGTCCCAAGGGGAATCCCCAGGCGACTTTTCAGTCCAAACCCATGGTCTCCTGGTGCATACTCAAATTGGACTGTTGTCAAGGAAATGTTGGATGTGCCCCTCCTATATATTATTGGAGCATTTATACCAGCAACTATGATTGCTGTGCTTTACTACTTTGATCACAGTGTTGCATCACAACTTGCTCAGCAGAAGGAGTTCAATCTAAGAAAACCCTCATCTTATCATTATGACTTGCTGCTCTTGGGATTTTTGACCATATTGTGTGGGCTTATTGGAATCCCTCCTTCCAATGGTGTGATTCCTCAATCTCCAATGCATACAAAGAGCTTAGCTACTCTAAAACATCAGCTTTTACGGAATAAGCTTGTATCTACTGCACGAAAAAGCATGAGGAGGAATGTTAACTTGAGCCAGTTATACGAAAATATGAAAGAAGCATATGATGAAATGCAGACTCCATTGGTTCCCCAAATGCCACCTACTTTGGGGCTGAAAGAACTGAAGGAATCTACCATTGAACTGGCCTCAAGTCATGGATATATTGATGCCCCTGTTGATGAGGTTGTCTTTGATGTGAATAAGGATGTTGATGACCTTTTGCCAGTTGAAGTTAAAGAGCAACGTCTAAGCAATCTAATGCAGGCATTGATGGTTGCAGCTTGTGTTGCTGCTATGCCCCTTTTGAAGAAGATACCGACTTCAGTGCTTTGGGGCTACTTTGCTTTCATGGCCATTGAAAGTTTGCCAGGAAATCAGTTTTGGGAGAGAATATTGTATCTTTTCACTGCCCCAAGTCGAAGATACAAACTGCTGGAAGAGTACCATGCCACCTTTGTTGAGACCGTTCCCTTCAAAACAGTAGCCATGTTTACAGTGTTCCAGACAGTGTACTTGCTTCTCTGCTTCGGCATAACCTGGATACCAATTGCTGGGGTCCTTTTCCCATTGTTAATCATGCTTCTTGTCCCAGTACGGCAGTATTGTCTTCCAAAGTTTTTCAAAGGTGCCCATCTTCAAGAGCTGGATGCAGCAGCATACGAGGAAGCACCTGCCATTGCTTTCAACATGTCCTTTGAAGGTCCAAGTAACCAAGCACCAACAGTAAATATCAGTGGTGGGGAAATTCTTGATGAAGTTATTACGAGGAGTCGTGGAGAGATTCGCCGCATACACAGCCCCAAAACAACAAGTTCAACACCAACTTCAACAGGAGATATAAGACCAGCTAGTAGTCCTCAGATTGGAAGGAGTATCTCAAGCCCTCGAGTGACTGAATTGAGAGGGGAAAGCAGCCTGAGACCAACTGGGAAGGAGATCAAGTTGATGCAAACACCTAGTCCACGATCACCAGCTCTTGAAAAAGTTAACAAAGGTTCACATTCAAGTTAA 2217 0.4375 MQVVKMGFRYFDHCTSMEETFVPFRGIKNDLKARIACYRQDWTSGFQAGIRILAPTTYIFFASAIPVISFGEQLERNTDGSLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVLMYTFMYNFAKDRKDLGHKLFLPWTGWVCAWTALLLFLLAILGACSIINRFTRIAGELFGLLIAMLFMQQAIKGLVEEFGAPKNKGEGINQIALQSSWLFGNGMFALVLSFGLLFTGLQSRKARSWCYGTGWLRGFIADYGVPLMVLIWTAVSYIPVNKVPRGIPRRLFSPNPWSPGAYSNWTVVKEMLDVPLLYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVSTARKSMRRNVNLSQLYENMKEAYDEMQTPLVPQMPPTLGLKELKESTIELASSHGYIDAPVDEVVFDVNKDVDDLLPVEVKEQRLSNLMQALMVAACVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKLLEEYHATFVETVPFKTVAMFTVFQTVYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYCLPKFFKGAHLQELDAAAYEEAPAIAFNMSFEGPSNQAPTVNISGGEILDEVITRSRGEIRRIHSPKTTSSTPTSTGDIRPASSPQIGRSISSPRVTELRGESSLRPTGKEIKLMQTPSPRSPALEKVNKGSHSS 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02197 738 Gene3D Helical hairpin bin 34 76 - -
Spst9g02197 738 PANTHER ANION EXCHANGE PROTEIN 17 626 IPR003020 GO:0005452|GO:0006820|GO:0016020
Spst9g02197 738 MobiDBLite consensus disorder prediction 662 738 - -
Spst9g02197 738 MobiDBLite consensus disorder prediction 668 702 - -
Spst9g02197 738 Pfam HCO3- transporter family 478 568 IPR011531 GO:0006820|GO:0016020
Spst9g02197 738 Pfam HCO3- transporter family 220 391 IPR011531 GO:0006820|GO:0016020
Spst9g02197 738 Pfam HCO3- transporter family 23 196 IPR011531 GO:0006820|GO:0016020
Spst9g02197 738 FunFam probable boron transporter 2 34 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02197 Spst-Chr9 49021223 49026606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02197 17 713 Antiporters AT3G62270 74.714 0.0 1058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02197 K24194 - gmx:100793554 1339.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02197 9 49021223 49026606 Spst9g02197 9 49021223 49026606 ECH
Spst3g04558 3 97222216 97226550 Spst9g02197 9 49021223 49026606 PCT