Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02195 ATGCAGAGCGTCGCTTTTACTCTCTCGCCCTCTCTATCTCTTCCTCTCCGCAACACTTCTCTACAACACGCTTCTAGACCTTTCCTTTCTCTCAGACTTTTCGCCAAACACACAGAAGCTGTGAACTCCAATGGCGCCTCTTCCTCTTCCTCTTCCACTTCCTTCCTTCGCCGATCTTGGACGCTCTCCCCTTCCTCTTCCTTCAAGTTCCGCCCCCTCCCTCCCTCCCCTCCGCGCGCCGCTGAAAGCGCCGTTCCCGACAGCGCGCCCGCCGACAACTCGCTGTTCAAAACTCTAGAGCTCGGCGCCTTGTTTGGCCTCTGGTACCTCTTCAACATCTACTTCAATATCTACAACAAACAGGTGTTGAAGGCTTTTCATTATCCGGTAACGGTGACTCTTGTTCAATTTGCCGTTGGGACTGTGCTCGTGGCATTTATGTGGGGTTTGAATCTCTACAAGAGGCCGAAGCTCAGTAGTGCTATGCTTGGAGCGATCTTGCCGCTAGCTGCGGTGCATACATTGGGAAATCTTTTCACTAATATGAGTCTTGGGAAGGTGGCTGTGTCCTTCACTCACACGATCAAGGCCATGGAGCCATTCTTTTCAGTGGTCCTTTCTGCCATGTTTCTTGGAGAGTTTCCTACACCATGGGTGGTTGGTTCCCTTGTGCCTATTGTTGGTGGAGTTGCACTGGCATCTGTTACTGAGGCCTCTTTCAATTGGGCTGGATTTTGGAGTGCAATGGCATCCAATGTGACAAATCAATCCCGTAATGTTCTTAGCAAAAAGGCCATGGTTAACAAAGAGGATTCTATGGACAACATTACTCTCTTCTCTATAATTACAGTAATGTCCTTCTTCTTGCTAGCACCTGTGGCTGTCTTCAAGGAGGGTGTCAAATTTACCCCTGCTTACTTGCAATCTGCTGGGTTAAATGTTAGACAACTTTACATCAGATCTCTTCTTGCTGCACTCTGTTTCCATGCGTATCAACAAGTGTCTTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGCAATTGTGTGAAGCGGGTTGTGGTCATTGTGAGCTCTGTCATCTTTTTCCAAACACCTGTCTCACCCGTGAATGCTTTTGGGACTGCTGTAGCTCTTGCTGGCGTGTTCCTCTATTCGAGGGTGAAGCGAATTAAGTCAAAGCCAAAAACAGCTTAA 1206 0.4826 MQSVAFTLSPSLSLPLRNTSLQHASRPFLSLRLFAKHTEAVNSNGASSSSSSTSFLRRSWTLSPSSSFKFRPLPPSPPRAAESAVPDSAPADNSLFKTLELGALFGLWYLFNIYFNIYNKQVLKAFHYPVTVTLVQFAVGTVLVAFMWGLNLYKRPKLSSAMLGAILPLAAVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVVLSAMFLGEFPTPWVVGSLVPIVGGVALASVTEASFNWAGFWSAMASNVTNQSRNVLSKKAMVNKEDSMDNITLFSIITVMSFFLLAPVAVFKEGVKFTPAYLQSAGLNVRQLYIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPVNAFGTAVALAGVFLYSRVKRIKSKPKTA 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02195 401 PANTHER SOLUTE CARRIER FAMILY 35 100 395 - -
Spst9g02195 401 Pfam Triose-phosphate Transporter family 100 389 IPR004853 -
Spst9g02195 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 143 235 - -
Spst9g02195 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 313 392 - -
Spst9g02195 401 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 99 399 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02195 Spst-Chr9 48985444 48989025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02195 1 401 Antiporters AT5G33320 70.213 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02195 K15283 - gmx:100804563 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04555 3 97199317 97206887 Spst9g02195 9 48985444 48989025 ECH
Spst9g02195 9 48985444 48989025 Spst9g02195 9 48985444 48989025 ECH
Spst3g04555 3 97199317 97206887 Spst9g02195 9 48985444 48989025 PCT