Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02171 AATGGGGGAACTTCATATGCATATCCGGGAAGACCATGGAGACCTTTTGCAAGAGTGGTTTTTGCATTCACTTTCATGGATCAATGTATAAAGCCTGCGGGGTGGAATAATTGGGGCAAAGTTGAGAATGAAAGAACTTCTTGCTTCTATGAATACGAGCAATCATTTCTAACTCCATTCACTTCTAAATTTACCAGCCAAGCCTTCCAGCTCGCGCCTGCAGTGGATTTGCCCTTGCTCGACATGCCCAAATCGCCACCGTGCACCATCCACGACCGCACCACCACGTGGAATCTTGTAACCACCTCTCAGTGA 315 0.473 NGGTSYAYPGRPWRPFARVVFAFTFMDQCIKPAGWNNWGKVENERTSCFYEYEQSFLTPFTSKFTSQAFQLAPAVDLPLLDMPKSPPCTIHDRTTTWNLVTTSQ 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02171 104 Pfam Pectinesterase 5 54 IPR000070 GO:0030599|GO:0042545
Spst9g02171 104 SUPERFAMILY Pectin lyase-like 4 55 IPR011050 -
Spst9g02171 104 Gene3D - 1 72 IPR012334 -
Spst9g02171 104 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 6 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02171 Spst-Chr9 48056863 48063551 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02171 2 81 Carbohydrate Esterase AT1G05310 33.333 6.74e-10 52.8