Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02157 ATGGGCCATGCAAAGGGAAAAAAGTGGAAGCATAACCTGATTCTCAAGGCGTGGGAGCGTTGCCCATTTTCAAGGTCACACTTAAAACTAAAGTCATTGTTAGAGAATGATGGTGGTGGTGGTGGTGCTGCTGCTGCTGCTGATTTTGATGATGATGATGATGATGAGAAGGGTGCAGTAGCGCCTCATGGTTGTTTTCCAGTGCACGTTGGAGCAGAGAGAGAAAGGTTCGTGGTGAAGATCAAGTACGTTAACCACCCACTGTTTCAGATGCTGCTAGAAGAGGCTGAAGAGGAACACGGATTTGACTGTGATGGCCCCATTTGGCTTCCTTGCAACGTCGATTTGTTCTACAAAGTGCTGGCTGAGATGGATCGTGAAGAGAAGCATAGCAGCATCACTGTCCACAGTACTCGAAGAAGCTCCATCGCCATTGCTAAGGTTTTTTCTTTCTTCGTTCTTTGCAGACCATCTCGTCTTCTTTGTTACATGAACAAGGATCATAGTGCATACAGTGTTATGGATTCGGAATTGCTGAGGTTAAATCGATTTCAGTAG 558 0.457 MGHAKGKKWKHNLILKAWERCPFSRSHLKLKSLLENDGGGGGAAAAADFDDDDDDEKGAVAPHGCFPVHVGAERERFVVKIKYVNHPLFQMLLEEAEEEHGFDCDGPIWLPCNVDLFYKVLAEMDREEKHSSITVHSTRRSSIAIAKVFSFFVLCRPSRLLCYMNKDHSAYSVMDSELLRLNRFQ 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02157 185 Pfam Auxin responsive protein 52 122 IPR003676 GO:0009733
Spst9g02157 185 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 45 120 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02157 Spst-Chr9 47198167 47198724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02157 47 132 Calmodulin-binding Proteins AT4G34750 43.023 8.63e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02157 K14488 - gmx:100793967 234.187