Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02156 ATGGCTAACACTGAACTGATCGTAAAGCAAGGAGAACCAACGCGAGTTCAGCCTGCAGAGGAAACAGAAAAGGGACCTTACTTCCTTTCAAACCTGGACCAGAACATTGCTGTTCCAGTGCGCACGGTTTATTGCTTCAAATCTGCTTCCAGAGGAAACGAGGATGCTGCACAAGTTATCAAGGACTCCTTGTCCAAGATTCTTGTCTCGTATTACCCCATGGCAGGGACGTTGGCTATAAGCTCGGAAGGGAAGTTGATAGTGCATAATCCTGGGGAGGGTGCAATGTTTGTTGAGGCTGAAGCAAACTGTGACATCCAAGAGATAGGGGACTTGACAAAACCAGACCCTCGTACTCTCGGGAAACTCATTTACAATGTTCCTGCTGCTTCAAACATTCTTGAGATGCCTCTTATGACTGTTCAGGTGACAAAGTTCAAATGCGGAGGATTTACTCTGGGGCTTTGCATGAACCACTGCATGAAAGATGGACTATGTGCCATGGAGTTTGTGAATGCATGGAGTGAGACAGCACGAGGTTTAGACCTAAAGATCCCACCATTTCTTGATCGAACCATAATCAAAGCACGTGACCCTCCCAAAGTAGAGTTCCAACACAACGAATTTGCAGAAATAGAAGACGTATCAAACACTAAAAAGCTTTACGCGGAAGAGAACATGCTCTACAGATCCTTCTTCTTCGATCCTGAGAAGCTCGATCTGCTTAAGAAAAAGGCCACAGAAGACGGGGTTTTGGGCAACTGCTCCACTTTTGAAGCTCTCTCAGGGCTTGTATGGAGAGCTCGAACTGCAGCATTAAGGATGCAACCTGATCAACAAACAAAGCTTCTCTTTGCAGTTGATGGAAGGTCAAGATTCGTGCCCCCAATACCAGAAGGGTACTTTGGCAATGCTATTGTGTTGACAAATGCGTTGTGTGAGGCTGGGGAGTTACTGAAGAACCCTTTGTCATATTCTGTGGGATTGATTCGCAAGGCAATTGACATGGTCACAGATAGTTACATGAGATCTGCCATTGACTATTTTGAAGTCACAAGAGCTAGACCTTCTCTAACAGCCACCCTTTTGATCACAACTTGGACTAAGCTGTCTTTCCACACAACTGATTTTGGCTGGGGTGAACCTCTATGTTCTGGCCCTGTGACCCTTCCAGAGAAAGAAGTCATTTTGTTCTTATCACATGGTCTGGGAAGGAAAAGCATAAATGTTCTTCTGGGTTTGCCTAAGTCTGCCATGGAAACTTTTGAATCATTGATGATGCAAGTGTGA 1290 0.4519 MANTELIVKQGEPTRVQPAEETEKGPYFLSNLDQNIAVPVRTVYCFKSASRGNEDAAQVIKDSLSKILVSYYPMAGTLAISSEGKLIVHNPGEGAMFVEAEANCDIQEIGDLTKPDPRTLGKLIYNVPAASNILEMPLMTVQVTKFKCGGFTLGLCMNHCMKDGLCAMEFVNAWSETARGLDLKIPPFLDRTIIKARDPPKVEFQHNEFAEIEDVSNTKKLYAEENMLYRSFFFDPEKLDLLKKKATEDGVLGNCSTFEALSGLVWRARTAALRMQPDQQTKLLFAVDGRSRFVPPIPEGYFGNAIVLTNALCEAGELLKNPLSYSVGLIRKAIDMVTDSYMRSAIDYFEVTRARPSLTATLLITTWTKLSFHTTDFGWGEPLCSGPVTLPEKEVILFLSHGLGRKSINVLLGLPKSAMETFESLMMQV 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02156 429 MobiDBLite consensus disorder prediction 1 22 - -
Spst9g02156 429 Gene3D - 210 429 IPR023213 -
Spst9g02156 429 FunFam Spermidine hydroxycinnamoyl transferase 6 209 - -
Spst9g02156 429 Pfam Transferase family 13 426 - -
Spst9g02156 429 Gene3D - 3 209 IPR023213 -
Spst9g02156 429 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 15 425 - -
Spst9g02156 429 FunFam Tryptamine hydroxycinnamoyl transferase 213 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02156 Spst-Chr9 47171657 47174107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02156 14 429 Monolignol Biosynthesis Gene Families AT5G48930 37.269 6.97e-91 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02156 K15400 - gmx:100794490 764.222