Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02145 ATGAATAAGCTAGAGGACAAGACAGTGGTCCTTATGTCCATTGGGGAGTTTAGAATCTTGGTAGAGGATATCAATATTGTGGAGAGACTAGAGAGTTGTGTTAATAAAGGTGCAGGGCAGGCAGTGGCACTCAGAGTAACAGCAGATCGTTGTGCTTTCTATAATTGCAGGTTCCTTGGGTGGCAGTACTGCACTCTTGGAACATTGTCACATCCATTGCAAGTCCGCAGGGTTTATAACTGCACAGAGCAGAAACTCTCCACAGGAAAAAACAGATGTGTTGTCACAGGTAATGGGGGAACTTCATATGCATATCTGGGAAGACCATGGAGACCTTTTGCAAGAGTGGTTTTTGCATTCACTTTCATGGATCAATGTATAAAGCCTGCAGGGTGTTCTGGACCGGGTTTCTGTCCATCCCAAAGAGTGAAATGGGCCAGAGAATTGAAGAATGAAGGAGCTGAGCAGTTTCTGAGTCACACCTTCATTGATCCAGAATCAGACAGATCTTGGCTTCCTCAAAGAATGACCTTCAATTATTAA 543 0.4401 MNKLEDKTVVLMSIGEFRILVEDINIVERLESCVNKGAGQAVALRVTADRCAFYNCRFLGWQYCTLGTLSHPLQVRRVYNCTEQKLSTGKNRCVVTGNGGTSYAYLGRPWRPFARVVFAFTFMDQCIKPAGCSGPGFCPSQRVKWARELKNEGAEQFLSHTFIDPESDRSWLPQRMTFNY 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02145 180 Gene3D - 5 82 IPR012334 -
Spst9g02145 180 Gene3D - 83 179 IPR012334 -
Spst9g02145 180 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 92 172 - -
Spst9g02145 180 SUPERFAMILY Pectin lyase-like 20 171 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02145 Spst-Chr9 46179319 46185991 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02145 20 163 Carbohydrate Esterase AT5G07420 26.768 1.28e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02145 K01051 - gmx:100810259 191.045