Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02132 ATGGAATGTAAAAGGGATGGTGCTTTAAGGGCCAAAGAACTTGCAGAGAAGATGCTTTTACAGAAGGACTTTGGTCGGGCAAGAATGTTTGCAATGAAGGCTCTAGAATTAAATCCCAATCTTGATGGCCTTCCTCGATTTCTAGCAACTATTGAGGTGTATATCTCAGCTGATAAAAAAGTTAATGGAGAAGTTGATTGGTACAGGATCCTTGGTGTGCAACCCTTGGCTGATGAAGAAACAATTCGAAGACGATATAGGAAACTGGCTCTGACTCTGCACCCTGATAAAAATAAATCTGTAGGTGCAGATGGGGCATTTAACCTTATCTCACAGGCTTGGAGTTTGTTATCTGATAAAGCCAAGAGAATCAGCTATGACCAAAAGTACAACTTATGGCGTACATTCCATGGAAATCCTTCTGGGAAACCATCTATGCCAGCTAATCAGAACGGTTTATATAGTAATGTCTTCACTCCTGTGACGTTGAAACATACATTTTGGACCATTTGCAATTTCTGTGAGACAAAGTTTGAGTACCATAATGTTTATATTAACTCTGATCTTGTCTGTACATGCTGTCATAAGCGATTCATGGCTTCTGAGACATCGCCTCCAGCTGGATACAGAAATGGGTCATCCACTTCAAGAATATCTCAGATGAAGCAACATAACTTCAACTCAAGCAGAATGGAAAGAAGTAATTATCATGTTCCTGGAAGGACACTAATGTCTGCTGTCAATTCAGCACATGGGTCGGGCCCTTTCTCTATGCCTAATGGCACTTCCCGCTTTCCAACATCAGCTTCTAGTGTTGCAGAGGCTCATGGTGCTTTTAGTACGCTTTCTGAGAATTTGAAGAGAAGGTATGAAGATTCAACTGCGTGGAGGGAGGATGCACATTTTGGGAAAACTTATGTTGTTGAGAGAACTGGTGCTGGTTCAGTTTTTCAGTCCTCTCGATTTGGTTCAAATTCTAGTATGAACGGTGACAAGCCAAGGAAGAGAAGGTCCACTGATGAACATAAAGTAGGTAGCGATAGAAGAGATATGGAAAACAAAACAGTATCTCAAAATGAAGGAACAAACTTGGCTAATGAGTTCGGGTCAGGAAGGGTAAATGCTGCTGGAAATTACAGACGCAATGGTGCCAGGGACTTATCACAGCTTCAAATGAAGCAGATATTGGTGGAAAAGGCTAGGAAAGAGATTCTGAAAAAGCTTGATGAGTGGAAAGCTTCTTCTGCATCAAAGAGTCTAGACAAGTCAAATAACACTGAAACAGAAATCAGTGAGAAGGGGAACAATAGGGGAGTTAAAGGTTTAAAACCTGGTGAGCAAGAATTTGTGGATACTAAGGCTGCGGGCAAGAAGCGCTTTTCTGCTGATCCAGATCCTGAACTGCCTGGTTCTCTCTCTATGAATGTTCCGGACCCAGATTTCCATGATTTTGATGGAGACCGAATTGAGAATGCTTTTGGAGAAAACCAGGTGTGGGCTGCATATGACAATGATGATGGCATGCCTCGCTTCTATTGCTTAATCCATGATGTTATCTCGAAGAATCCTTTCAATATGAGGATAAGCTGGTTGAATACCAAAAGCAATGATGAATTGGCCCCAATTAAGTGGATCAATTCTGGCTTTCTTAAGACCAGTGGAGATTTCAGAATAGGAAAGCGTGTGTCCTATGGCACTCTTAATTCCTTCTCGCACAGGGTGAAGTGGACAAAAGGTTTGAGAGGGGTTGTCCATATATACCCGAAGAAAGGTGACGTGTGGGCACTGTATCGGAACTGGTCTCTTGACTGGAATGAATTCACTAAAGATGAAGTAATACAGAAATATGACATGGTGGAGGTGCTTGAAGACTTCAGTGAAGAGCAAGGTGTCAATGTTGCCCCTCTTGTCAAGGTTGCAGGTTTCAAGACAGTATTTCGCCAGAATGTTGATCCAAGAAAAATCAGGAATATTTCGAAGGTACAGATGTTTCGTTTCTCACACCAGGTACCTTCATACTTGCTTACCGGTGAAGAGGGTCCCAATGCTCCTAAAGGTTGCTTGGAGCTTGATCCTGCTGCTACGCCAATGGAACTTCTTCAGGTGTTAACTGAAGATCTGGAGCAAGAAATAGTAATGACAACTGAAAAATCTGTGGAAGGTGAACTGAAGCATAAAGAGAATGCCAGGGAGGAGGGTTTGCTTAAAGAGTGCCAGACAACTAAGGAGGAAGGTTCTGATGAAGGATTGGGAGAGAAGAGACGCAAGCCAGAGATTTTGTTTGTATATAAGCGAAGACGTCTGGGGCAAAAGTGA 2316 0.424 MECKRDGALRAKELAEKMLLQKDFGRARMFAMKALELNPNLDGLPRFLATIEVYISADKKVNGEVDWYRILGVQPLADEETIRRRYRKLALTLHPDKNKSVGADGAFNLISQAWSLLSDKAKRISYDQKYNLWRTFHGNPSGKPSMPANQNGLYSNVFTPVTLKHTFWTICNFCETKFEYHNVYINSDLVCTCCHKRFMASETSPPAGYRNGSSTSRISQMKQHNFNSSRMERSNYHVPGRTLMSAVNSAHGSGPFSMPNGTSRFPTSASSVAEAHGAFSTLSENLKRRYEDSTAWREDAHFGKTYVVERTGAGSVFQSSRFGSNSSMNGDKPRKRRSTDEHKVGSDRRDMENKTVSQNEGTNLANEFGSGRVNAAGNYRRNGARDLSQLQMKQILVEKARKEILKKLDEWKASSASKSLDKSNNTETEISEKGNNRGVKGLKPGEQEFVDTKAAGKKRFSADPDPELPGSLSMNVPDPDFHDFDGDRIENAFGENQVWAAYDNDDGMPRFYCLIHDVISKNPFNMRISWLNTKSNDELAPIKWINSGFLKTSGDFRIGKRVSYGTLNSFSHRVKWTKGLRGVVHIYPKKGDVWALYRNWSLDWNEFTKDEVIQKYDMVEVLEDFSEEQGVNVAPLVKVAGFKTVFRQNVDPRKIRNISKVQMFRFSHQVPSYLLTGEEGPNAPKGCLELDPAATPMELLQVLTEDLEQEIVMTTEKSVEGELKHKENAREEGLLKECQTTKEEGSDEGLGEKRRKPEILFVYKRRRLGQK 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02132 771 MobiDBLite consensus disorder prediction 413 445 - -
Spst9g02132 771 PRINTS DnaJ domain signature 102 122 IPR001623 -
Spst9g02132 771 PRINTS DnaJ domain signature 86 101 IPR001623 -
Spst9g02132 771 PRINTS DnaJ domain signature 68 86 IPR001623 -
Spst9g02132 771 MobiDBLite consensus disorder prediction 317 369 - -
Spst9g02132 771 Pfam Domain of unknown function (DUF3444) 473 679 IPR024593 -
Spst9g02132 771 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Spst9g02132 771 MobiDBLite consensus disorder prediction 330 355 - -
Spst9g02132 771 PANTHER BNAC03G44070D PROTEIN 1 696 - -
Spst9g02132 771 SMART dnaj_3 65 122 IPR001623 -
Spst9g02132 771 Gene3D DnaJ domain 64 170 IPR036869 -
Spst9g02132 771 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Spst9g02132 771 MobiDBLite consensus disorder prediction 725 752 - -
Spst9g02132 771 Pfam DnaJ domain 66 127 IPR001623 -
Spst9g02132 771 CDD DnaJ 66 119 IPR001623 -
Spst9g02132 771 SUPERFAMILY Chaperone J-domain 59 132 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02132 Spst-Chr9 45593817 45596132 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02132 5 206 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.649 5.42e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02132 - - gmx:100797672 1234.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02132 9 45593817 45596132 Spst9g02132 9 45593817 45596132 ECH