Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02131 ATGGAAAACAGCCAGCAAGGGGGCCAAGGGCAATCGGGGGCGTACCCCGGTGCGGCGGCCGGAAGTGCAGGTGCAGGTGCAGGCGCTCCCCCCTTCCAGCATCTCCTCCACCAGCAGCAGCAGCAACTGCAGATGTTCTGGTCGTACCAGCGGCAAGAGATCGAGCACGTCAACGACTTCAAGAACCACCAGCTTCCCCTCGCCCGCATCAAAAAGATTATGAAGGCCGACGAGGATGTCCGCATGATCTCCGCCGAGGCCCCAATCCTCTTTGCCAAGGCCTGCGAGCTCTTCATCCTCGAGCTCACCATCCGCTCCTGGCTCCACGCCGAAGAGAACAAGCGCCGCACCCTCCAGAAGAACGACATCGCCGCCGCCATCACCCGCACCGACATTTTCGACTTCCTTGTTGATATCGTCCCGCGCGACGAGATCAAGGACGATGCTGCGCTCGTCGGCGCCACTGCTAGTGGTGTGCCCTACTACTACCCTCCCATTGGCCAGCCTGCCGGCATGATGATTGGCCGTCCCGCCGTTGATCCCGCCACCGGGGTTTACGTCCAGCCCCCGTCCCAAGCCTGGCAGTCCGTCTGGCAGTCCGCCGCGGAGGACGCATCCTATGGTGGCGCTGGGGGAGCTGGTGCCCAGGGGAGCATTGATGGCCAGAGGTAA 672 0.631 MENSQQGGQGQSGAYPGAAAGSAGAGAGAPPFQHLLHQQQQQLQMFWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDDAALVGATASGVPYYYPPIGQPAGMMIGRPAVDPATGVYVQPPSQAWQSVWQSAAEDASYGGAGGAGAQGSIDGQR 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02131 223 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 38 160 - -
Spst9g02131 223 MobiDBLite consensus disorder prediction 1 31 - -
Spst9g02131 223 FunFam Nuclear transcription factor Y subunit gamma 33 142 - -
Spst9g02131 223 SUPERFAMILY Histone-fold 39 136 IPR009072 GO:0046982
Spst9g02131 223 Gene3D Histone, subunit A 31 142 IPR009072 GO:0046982
Spst9g02131 223 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 64 127 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02131 Spst-Chr9 45589965 45590636 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02131 25 202 CCAAT-HAP5 Transcription Factor Family AT3G48590 83.422 3.34e-103 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Spst9g02131 CBFD_NFYB_HMF 2.2e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02131 - - gmx:100818447 351.673