Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02116 ATGATGATTGAGGTGGACCGCGCTAGTTTATTTGGCCTCCGCCGCGATATGGACGCGCTCTTCAACACCTCCAAGCCCAATAAGCACCTCTGGGAACTGATATGCGCCAAGATGAGGGAGAAGGGTTTCGATTGCCCTCCCACCATGTACAACAATAAGTGGTGCAACCTCCTCAAGGAGTTCAAGAAGGTCAAGCACCAGGACGGTGGAGGGAGTGGCTCCGCCAAGGTGTCGTATTACAAGGAGATTGAGGAGATCCTCAAAGAGAGGAGCAAGAATGATTAG 285 0.5193 MMIEVDRASLFGLRRDMDALFNTSKPNKHLWELICAKMREKGFDCPPTMYNNKWCNLLKEFKKVKHQDGGGSGSAKVSYYKEIEEILKERSKND 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02116 94 PANTHER FI21293P1 9 88 - -
Spst9g02116 94 Pfam Myb/SANT-like DNA-binding domain 14 86 IPR044822 -
Spst9g02116 94 Gene3D - 6 63 - -
Spst9g02116 94 CDD GT1 9 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02116 Spst-Chr9 43747913 43748263 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02116 3 92 Trihelix Transcription Factor Family AT1G13450 67.778 1.41e-36 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Spst9g02116 Myb_DNA-bind_4 5.8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02116 - - zju:107428405 140.584