Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02105 ATGCTCAGCAATTGCATATACAGGGGTCCAACTAATGGAAGTCGGGGAAAGGTTGTCTTACTTTTTGATGATAATCCCTTGTCAAAAATTGGTGTTAGATTTGATAAACCCATACCTGATGGAGTTGATCTCGGAGGCTGCTGTGAGGGCGGTCAAGGATTTTTCTGCAATGTGACTGATCTTCGGTTGGAAAACAGTGGCATTGAAGAGCTCGACAAATTACTCATTAATACATTATTTGAGGTCGTGGTTAGTGAGAGCAGAAATGAACCCTTCATTTTGTTCATGAAAGATGCAGAGAAGTCTATCGTAGGAAATGGAGATCCATTTTCATTTAAAAGTAGGCTTGAAAATCTTCCTGACAATGTGGTGGTTATAGGTTCACACACTCACACTGACAGTCGTAAGGAGAAGTCACATCCTGGGGGTTTGCTTTTTACAAAGTTCGGAAGTAATCAGACTGCTCTTCTTGATTTGGCTTTCCCTGATAGTTTTGGAAGATTGCATGACAGGGGAAAGGAGGTACCAAAGCCAAACAAAACCTTAACTAAGCTTTTCCCAAATAAAGTAACAATTCACATGCCACAGGATGAAGGACTTCTAGCATCTTGGAAGCAGCAACTTGATCGAGATGTCGAGACCCTTAAAATTAAAGGGAATTTGCACAATTTACGAACAGTTTTGAGCCGTTGTGGGGTGGAATGTGAAGGACTTGAAGCCTTGTGCATTAAGGATCAAACACTTACTATTGAAAATGCTGAGAAGATAGTTGGTTGGGCTATAAGCCATCATCTCATGCAGAATGCCGAAACTGATCCTGATGCAAAGCTTGTAGTGTCTTGTGAGAGCATCCAGTATGGAATTGGGATCTTACAGTCTATCCAGAATGAGTCAAAAAGCCTGAAGAAATCTCTAAAGGTTGTTGTTATGAACGATATTGTAACAGAAAATGAGTTTGAAAAGAGGCTTTTGGTTGATGTTATTCCACCAAATGACATAGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAAGATACATTAAAGGAATTGGTTATGCTTCCTTTACAAAGGCCTGAGTTATTTTGCAGAGGGCAATTAACCAAGCCATGCAAGGGCATCCTTTTATTTGGTCCTCCTGGAACAGGGAAGACAATGCTTGCAAAGGCAGTTGCTACTGAAGCTGGTGCGAATTTCATCAACATTTCCATGTCAAGTATCACGTCTAAGTGGTTTGGTGAGGGTGAAAAATATGTGAAAGCTGTTTTTTCCCTGGCAAGTAAAATTGCTCCTAGCGTGATATTTGTTGATGAAGTTGATAGCATGTTGGGCAGGAGGGAAAATCCTGGGGAGCACGAGGCCATGCGAAAGATGAAAAATGAATTTATGGTGAATTGGGATGGCTTACGCACCAAGGATACTGAGAGAGTTCTGGTGCTTGCAGCCACCAATAGGCCTTTTGATCTAGATGAAGCTGTCATAAGGAGGCTGCCTCGGAGGTTAATGGTAAATTTGCCAGATGCTCCAAATAGAGCAAAAATATTGAAAGTTATACTGGCAAAAGAAGACTTGTCTTCTGGTCTTGATATGGATGCAATTGCAAGTATGACCGATGGATATTCTGGAAGTGATCTTAAGAATTTGTGTGTAACTGCTGCACACCGTCCAATTAAAGAGATATTAGAGAAGGAAAAAAAGGAACAGGCTGCTGCTCTAGCAGAAGGTATACCTGCTCCCGCATTAAGTGGAAGTGCAGATATCCGATCTTTAAACATGGAAGATTTCAAACATGCTCATCAACAGGTCTGTGCAAGCGTTTCTTCTGAATCCGTAAATATGACCGAGCTTCAACAGTGGAATGAACTATACGGTGAAGGTGGTTCAAGAAAGCCGCATAACGCTAGCAGGGCTTGGAGTGGAGCCTTGCAGAATTATGGGCAGGCTCTGCTGCATCTATTTTGTTCCTCATCCCCTGGCCGCCACCTCTCAAAAGGATGTGTGTTGAAAATGTCTCTCTAG 2025 0.4178 MLSNCIYRGPTNGSRGKVVLLFDDNPLSKIGVRFDKPIPDGVDLGGCCEGGQGFFCNVTDLRLENSGIEELDKLLINTLFEVVVSESRNEPFILFMKDAEKSIVGNGDPFSFKSRLENLPDNVVVIGSHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNKTLTKLFPNKVTIHMPQDEGLLASWKQQLDRDVETLKIKGNLHNLRTVLSRCGVECEGLEALCIKDQTLTIENAEKIVGWAISHHLMQNAETDPDAKLVVSCESIQYGIGILQSIQNESKSLKKSLKVVVMNDIVTENEFEKRLLVDVIPPNDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCRGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSGLDMDAIASMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKEQAAALAEGIPAPALSGSADIRSLNMEDFKHAHQQVCASVSSESVNMTELQQWNELYGEGGSRKPHNASRAWSGALQNYGQALLHLFCSSSPGRHLSKGCVLKMSL 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02105 674 Pfam AAA+ lid domain 530 564 IPR041569 -
Spst9g02105 674 Gene3D - 334 615 IPR027417 -
Spst9g02105 674 CDD RecA-like_ATAD1 339 505 - -
Spst9g02105 674 Gene3D - 508 602 - -
Spst9g02105 674 SMART AAA_5 372 509 IPR003593 GO:0016887
Spst9g02105 674 ProSitePatterns AAA-protein family signature. 479 498 IPR003960 GO:0005524|GO:0016887
Spst9g02105 674 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 67 633 - -
Spst9g02105 674 Pfam ATPase family associated with various cellular activities (AAA) 376 505 IPR003959 GO:0005524|GO:0016887
Spst9g02105 674 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 334 510 - -
Spst9g02105 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 335 614 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02105 Spst-Chr9 43241068 43254654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02105 335 587 Calmodulin-binding Proteins AT3G56690 40.000 8.10e-42 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02105 - - gmx:100780098 1139.02