Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02099 ATGGGTAGTTGCAGTGCTCAGTTGCAGTCCTCTCAGACCCAAGTGCTTCTGCAGTTGAAAAAGCACTTGGAGTACCCAAGACAATTGGAAATATGGAGAGATCGTTGGACAGATCTTTGCTCCTTTTCTTCTTCTGGGCAAGTGAATGTCACATGCAAGGACAATTTTGTCACTGAGCTCTCCATCTTGGGTGATAAGCCAACCAAGGGTAGAGATTTTGATGGATTTGCCATTCCAAATCAAACACTATCAGGTAGCTTCTCCATGGACTCTTTTTTAGCTACTCTGGCAAGGTTAACTAGCCTGAGAGTCCTTAGTCTTGTCTCTTTGGGCGTGTGGGGACCGCTTCCTGATAGAATTCACAGACTCTATGCACTTGAACATTTGGACTTGAGTTCCAATTATCTTTATGGATCAATCCCTCCAAAGATTTGCACAATGGTGAACCTTCAAACTCTTGGATTGGGTGATAACTTCTTCAATGGTACCATCCCAGACTTGTTCAATTCATCAAGCAATCTCTCAGTTCTTAGTTTGAGGAATAACAGGTTGAAGGGTCCATTTCCACCTTCAATCCTTAGTGTCCCCACTTTAAAAGTCATTGACATGTCAAGCAATCAACTATCAGGGTTCTTGCAAGATTTTAGTGTTTTGAGTAGCTTGGAACAGCTAGATTTAAGAGAAAACAGATTAGAGTCTTCCCTGTCTGCAATGCCAAAGGGGTTGATTAGTCTGTTCCTCAGCAGAAATTCCTTCTCAGGTGAAATTCCCAAGCGCTATGGTCAACTTAACATGCTTCAGAAGCTTGATGTTTCCTTCAACGCACTCACAGGCACTGCTCCTGCTGAACTTTTTTCTTTGCCAAACATTAGTTACTTGAATTTGGCATCCAACATGTTAAATGGACCACTGCAGACTCACCTAAGATGTAGCAACCAACTTTTTTTTGTTGACATATCTTACAATAGGTTAGTGGGGGACTTGCCTTCTTCACTGAGCACTAAATCAGAAAATAGAGTTGTTAAGAGTGATGGAAACTGTTTATCTGGGAGTGTGCAGCATCAGCATGCAGTATCCTACTGCACAGAAGCTCATGCGAAGAAGAAATCATACAGAATTGGAATTTTTGTTGGGGTCATTGTAGGAATTCTTTTAATCTCTGTGGTTTTGGCTATGACCATTGTTATAACTTGTAAGAAGTTTTTCCATCGAGGAGTTTCAGAGCAGCACCTATTGCATAAAACAGTTCAAGATAGCAGCAATTCAGCAGGGTTCTCCTCTGAGCTTGTCACAAATGCAAGGTATATTTCTGAAGCTGCAAAGTTAGGCAGAGAGGACCTCCCCACATGTAGGTCATATTCTTTGGAAGAGCTAAAGGAAGCCACAAATAGCTTTGACAACTCTACTTTCATGGGTGAAAATATATATGGGAAGCTTTATAGAGGAAAACTGGAGAGTGGGATGCAGATTGTAATAAGGTCCATGCCTTTGTCAAAAAAGTATTCAATTAGGAATTTCAAACTGCGGTTGGATTTGCTTGCAAAGCTCCGTCACCCTCATTTGGTATCCCTCCTGGGTCACTGCATTGATGGTGTTGTAGGAGAGAATAGTGAGACAAATGTCTTCCTCATTTATGAATATGTGCCAAATGGGACTTTTCAAAGATATCTCCCTGGAGATATTCCTGGCAAGGTTTTCAATTGGTCAGAGAGATTGGCAGTACTAATTAACATTGCTAAGGCTGTGCACTTCCTACACACTGGCATGATACCTGGTTTCTTCAAAAATCGACTTAAGACAGACAATATCTTGCTGGATGAGAATTGGATGGCAAAGTTGAGTGACTATGGATTGTCCATTATATCAGAAGAAACTGATGCATGTGGGGTAAAAGGAGAAAGTCCAAATTCATGGCAAATGAAAATGTTAGAGGATGATGTTTATAGCTTTGGATTCATACTACTGGAAGCACTTGTTGGACCTTCTGTATCAGCTAAAACAGAAGCAATTGTGCTGAATGCAATGGCAACTTTCAATACTCAGGATGGCTGGAAAAAGATTGTGGACCCAGTTGTGCAAGCTACTTGCTCAAAAGAATCACTTTTTGTTGTGATTTCCACAGCAAATAAATGTATATCTCCTGAGTCATGGAACCGACCATCCATTGAGGAAGTCCTTTGGAACCTTCAGTATGCTTCTCAAATTCAGGCAAAAGCTGATGGGGATCAGAGAATTTGA 2238 0.4111 MGSCSAQLQSSQTQVLLQLKKHLEYPRQLEIWRDRWTDLCSFSSSGQVNVTCKDNFVTELSILGDKPTKGRDFDGFAIPNQTLSGSFSMDSFLATLARLTSLRVLSLVSLGVWGPLPDRIHRLYALEHLDLSSNYLYGSIPPKICTMVNLQTLGLGDNFFNGTIPDLFNSSSNLSVLSLRNNRLKGPFPPSILSVPTLKVIDMSSNQLSGFLQDFSVLSSLEQLDLRENRLESSLSAMPKGLISLFLSRNSFSGEIPKRYGQLNMLQKLDVSFNALTGTAPAELFSLPNISYLNLASNMLNGPLQTHLRCSNQLFFVDISYNRLVGDLPSSLSTKSENRVVKSDGNCLSGSVQHQHAVSYCTEAHAKKKSYRIGIFVGVIVGILLISVVLAMTIVITCKKFFHRGVSEQHLLHKTVQDSSNSAGFSSELVTNARYISEAAKLGREDLPTCRSYSLEELKEATNSFDNSTFMGENIYGKLYRGKLESGMQIVIRSMPLSKKYSIRNFKLRLDLLAKLRHPHLVSLLGHCIDGVVGENSETNVFLIYEYVPNGTFQRYLPGDIPGKVFNWSERLAVLINIAKAVHFLHTGMIPGFFKNRLKTDNILLDENWMAKLSDYGLSIISEETDACGVKGESPNSWQMKMLEDDVYSFGFILLEALVGPSVSAKTEAIVLNAMATFNTQDGWKKIVDPVVQATCSKESLFVVISTANKCISPESWNRPSIEEVLWNLQYASQIQAKADGDQRI 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02099 745 Pfam Protein tyrosine and serine/threonine kinase 471 726 IPR001245 GO:0004672|GO:0006468
Spst9g02099 745 PANTHER UNNAMED PRODUCT 83 660 - -
Spst9g02099 745 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 9 240 - -
Spst9g02099 745 Gene3D Phosphorylase Kinase; domain 1 429 547 - -
Spst9g02099 745 SUPERFAMILY Protein kinase-like (PK-like) 448 730 IPR011009 -
Spst9g02099 745 SMART LRR_typ_2 263 287 IPR003591 -
Spst9g02099 745 SMART LRR_typ_2 218 241 IPR003591 -
Spst9g02099 745 SMART LRR_typ_2 123 147 IPR003591 -
Spst9g02099 745 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 428 547 - -
Spst9g02099 745 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 548 745 - -
Spst9g02099 745 SUPERFAMILY L domain-like 11 353 - -
Spst9g02099 745 Pfam Leucine rich repeat 172 231 IPR001611 GO:0005515
Spst9g02099 745 Gene3D Ribonuclease Inhibitor 242 374 IPR032675 -
Spst9g02099 745 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 242 366 - -
Spst9g02099 745 Gene3D Ribonuclease Inhibitor 9 241 IPR032675 -
Spst9g02099 745 Gene3D Transferase(Phosphotransferase) domain 1 548 744 - -
Spst9g02099 745 ProSiteProfiles Protein kinase domain profile. 465 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02099 Spst-Chr9 43002808 43006909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02099 7 677 Miscellaneous Gene Families AT5G14210 51.391 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Spst9g02099 PK_Tyr_Ser-Thr 5.2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02099 - - gmx:100802978 1229.16