Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02098 ATGGCCACACACTCAAATCCAAACACGACCATCGACCCAAACAGCGGCTTCTGTTCTCGTTCTAGAATCTTCCACAGCCTCCGTCCAAACGTCCCCCTCCCTCCGCCTGCTCAGCCGCTCTCCATCATCGACTACGCCCTCTCCCTCCTCCCAGCCGCCGCCACCACCACCGAGACCTTCGCCCTCATCGACGCCGCCACGGACCGCCACCTCTCCTACTCCCTCTTCATCCGCCAAGTCAAATCCCTGGCCTCCTCACTCCAATCCCTCACCCCTCTCTCCAAAGGCCACGTGGCTCTAATCCTCACCCCAACCTCCTTATACGTCCCTGTACTCTACTTCGCTCTCCTCTCGCTTGGCGTCACAATCGCACCTGCGAACCCGCTCAGTTCCCCTTCCGAGGTGACTCACCTCGTCCGACTCGCTAAACCCACCATTGCCTTCGCCACCTCCACCGCCGCCACGAAGATCCCCTCCCTCAAATTCGGCACCGTTCTCATCGACTCCCCGCTCTTCCTCTCCATGCTCGACGCTAACGCAGACTCACACTCGCGCGCTTCCCGAGTCGAACTGAGTCAGTCCGAGACCGCCGCGATTCTCTTCTCCTCGGGCACCACAGGGCGCGTGAAGGGCGTGTTACTCACGCACCGCAATCTCATCGCAGTTATAGGTGGGTTCTATCACCTGAGGAGCATCGCGCTGAGCGAAGCCGACGAAGCGGAGCCGCATCCCGTGTCACTGTTCACGCTTCCGCTGTTCCACGTGTTCGGGTTCTTCATGCTGGTTAGGTCTATGGCCGTAGGGGAGACGCTCGTTCTGATGCAGAGATTCGATTTCGAAGGGATGCTCAAAGCCGTAGAGAGGTATAAAATCGCAGTGATGCCTGTGTCGCCGCCGCTCGTGGTGGCCCTCGCCAAGTCGGAGCTCGTGAACAAGTACGACCTCAGATCGCTTCGGATAATTGGTTGCGGCGGCGCCCCGCTCGGCAAGCAGGTCGCCGACGACTTCAAAGCCAAATTCACCCACGTTGAAATTGCTCAGGGCTATGGTCTGACTGAAAGTGCAGGAGGGGCAGCTAGAACGTTGGGTCCTGATGAGTTTAAGCGCCATGGTTCTGTGGGTCGACTATCAGAAAACATGGAGGCTAAGATAGTGGACCCTGTTACTGGAGAGGCATTACCTCCAAACCAAAAAGGGGAACTGTGGATTCGAGGTCCATCAATCATGAAAGGTTATGTAGGAGATGAGAAGGCGACAGATGAAACATTGGATTCAGAGGGATGGCTGAAGACTGGCGATCTTTGTTATTTTGACTCTGATGGTTTCCTCTACATTGTAGATAGACTGAAGGAATTGATCAAATACAAAGCTTATCAGGTTCCCCCTGCTGAATTGGAACATATACTTCTCACCAATCCTCACGTCGCTGATGCTGCAGTAGTTCCGTACCCAGATGAAGAAGCAGGACAGATTCCTATGGCCTTTGTAGTAAGAAAACCTGGAAGTAACATCTCTGCAGATCAGATCATGGAGTTTGTGGCAAAGCAGGTTTCTCCATACAAGAAGATACGGCGTGTTTCTTTTGTGAATTCTATCCCAAAATCTCCTGCTGGAAAAATTTTGAGAAGAGAATTAGTTGATTATGCTCAATCCATTGGTTCATCCAAATTGTAA 1674 0.5352 MATHSNPNTTIDPNSGFCSRSRIFHSLRPNVPLPPPAQPLSIIDYALSLLPAAATTTETFALIDAATDRHLSYSLFIRQVKSLASSLQSLTPLSKGHVALILTPTSLYVPVLYFALLSLGVTIAPANPLSSPSEVTHLVRLAKPTIAFATSTAATKIPSLKFGTVLIDSPLFLSMLDANADSHSRASRVELSQSETAAILFSSGTTGRVKGVLLTHRNLIAVIGGFYHLRSIALSEADEAEPHPVSLFTLPLFHVFGFFMLVRSMAVGETLVLMQRFDFEGMLKAVERYKIAVMPVSPPLVVALAKSELVNKYDLRSLRIIGCGGAPLGKQVADDFKAKFTHVEIAQGYGLTESAGGAARTLGPDEFKRHGSVGRLSENMEAKIVDPVTGEALPPNQKGELWIRGPSIMKGYVGDEKATDETLDSEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHILLTNPHVADAAVVPYPDEEAGQIPMAFVVRKPGSNISADQIMEFVAKQVSPYKKIRRVSFVNSIPKSPAGKILRRELVDYAQSIGSSKL 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02098 557 Pfam AMP-binding enzyme 53 455 IPR000873 -
Spst9g02098 557 SUPERFAMILY Acetyl-CoA synthetase-like 50 551 - -
Spst9g02098 557 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 17 547 - -
Spst9g02098 557 Gene3D - 451 553 IPR045851 -
Spst9g02098 557 Gene3D - 23 450 IPR042099 -
Spst9g02098 557 FunFam 4-coumarate--CoA ligase 2 451 551 - -
Spst9g02098 557 ProSitePatterns Putative AMP-binding domain signature. 199 210 IPR020845 -
Spst9g02098 557 CDD 4CL 62 545 - -
Spst9g02098 557 Pfam AMP-binding enzyme C-terminal domain 464 539 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02098 Spst-Chr9 42938078 42942717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02098 1 557 Monolignol Biosynthesis Gene Families AT5G63380 61.023 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02098 K01904 - gmx:100777435 899.812