Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02075 ATGGTGGCAGAAGATTTGGGGATTGATTACATGTGGAAGAGTATTGTATACCGGCATGCTTCCAAGGAGGATGAGGAGAGGATCCAGTTGGCTCTGGATTGCGAGGAAGCCATTCCTGGGAATGGTGACTGGGCTGTAAAACTAGGGATAAATCTCTTTTATAGTGCACATCTTAGTCGCTCTCCTCTTTATAGCAAGCAGATGCCTTACAATTCTGTTATATACTGTGCATTTGGTTGTGGCTCTCCAGCAAGCTCACCTGAAGAGCCAAAGGTGTACCAAAGAAGGGTCAACAGGCAGAAAAAGGTTGTTGCTGGGAAATGGTGTGGTAAAGTTTGGATGTCTAACCAGGTGCATCCCCTTTTAGCAAAAAGAGATTCTGAAGATGTTGAGGATGAGAAAATCTTACTTGGGTGGATATTACCTGATGAGAGAATTGAGAGATCAGAAAGTATCCTCAAAAGTGAAAGTACTAGCAGAAAATCAGGTAAGAAAAGGAAAATGACAGCAGAGAATGGACGAACCAGGAAAGGAAGTTATGCTAAGAAAACTGTACTGTCATATAATTCAACTGAAGATAAACCCAACTCACAGCCAAGGAGGGTTCATAGAAGTAAGAAAGCCAGGAATGTTGAGAGAGACCGTGCTGCTTTCAAAGGGGATAATTCTCCTCCATATCATCATAGAAAACCTACAAGCAAACAAACAAACTGCACTGAAAGTGATGCCCTTTCTGATGATTCGCTTGATGATGAAGATGATCACATGCAGCATAGAAGGAACTTTAACATTGACAATGATGTGGTTTCAAATGATACAATGGACTGTGATTCTGATTGGCAGCAGAGGGAAGCAAATAGCAGCCAGGACGTTGAAGATATGGAGAGAGATGCAATTTCAGAGGATTCTTCGGATGTTGGTTCTCTTCAGCTGCAAAAGAAGACTTCCGAAGGCAAGCACACCAAATGCATTAGTGAAGATGTAATTTCTGATGACCACATGGAGAGTTCTTTTCAAAAGCAACATAGGCGAATTCCTAAAAGCAGGCAAGGCAAGTATCTTACTGGAAAAGATATAATATCTGATGACCAACTAGAGCTGAAAATGCAGAAGCAGCGACGGAGGAATCCTAAAAGCAGGCAAGCCAAATACCTTAATGAAGAGGATTTTGCATCAGATGACCAACTGGAGGGCCATTACCGTAGGTATCAAAGAAGGAATCCTAAAGGCAGGCAGGTAAAATGTGTAGCCGAGGAAGATGAAATGTCCGGTGACCAATTGGAAGATCATTGTCAGAAGCTGCATACAAGTTTCTCTAGGAGAAAACAAGACAAAGGCATTAATAGAGACGTTAAAAATGTAATGTCTGATGACCAATTGGAGGATCATTCTCTGAAGCAGCAAAGAAGAATTCCTAAGAGCAGGCAAAACAAACACACTTATAAAGAAGTTATGGATGACTCGGCTGAAAATAATTCTCATCTGCTGCATAGAACTCCTAAAAGGAAGCCAGCTAAATGCGTGGACGAAGATGATATGAATTCAGATGATGAGGTGGAAGATGATCAGCAGCTGAGGAGAACTCTTCGAAGTAAACAATCTAAACCAAAAACACTTCAACAGATGAAACAAGCCAATTCCCTTCAAGCGAAAAACCAGGCATCTCGATCCATAAAACGTGGTTCTCGGGTGCTTGTGAAATCAAAGACTCCTCAGCAAATAAAACAGCGGAATAAGCAATCAAGCAATTCCCGAGAGTTTAGTTTACATATGGAAGAGGAAGAAGAAGGTGGACCTAGCACACGCCTTAGGAAGAGAGCCACAAAAGCTCAGGAGTCTGAAGGAAAATTGAAATACAAGCAAACAAAAAGGAATAAGGTGAAGACTTCTACAACTGCAAAGGTTTCAGTTGGTCATGCTAAAGGGAAGGATGGTGAAGCAGATTATCAGTGTGATATTGATGGGTGCACTATGAGCTTTGGGTCAAAACAGGAGCTGCTGCATCACAAGAGAAATATCTGCCCTGTAAAAGGGTGTGGGAAGAAGTTTTTCTCACACAAGTATCTGGTGCAACACCGGCGAGTTCATGAGGATGAACGCCCCTTGAAGTGCCCTTGGAAGGGATGCAAGATGACTTTCAAGTGGGCATGGGCTCGGACTGAGCACATTCGAGTCCACACTGGTGCACGGCCTTATGTATGTGCAGAGCCAGGTTGTGGACAAACATTCAGATTTGTGTCTGATTTCAGTCGTCATAAGCGAAAGACTGGTCATTCAGCGAAGAAGAGTCGTCAATAG 2298 0.4265 MVAEDLGIDYMWKSIVYRHASKEDEERIQLALDCEEAIPGNGDWAVKLGINLFYSAHLSRSPLYSKQMPYNSVIYCAFGCGSPASSPEEPKVYQRRVNRQKKVVAGKWCGKVWMSNQVHPLLAKRDSEDVEDEKILLGWILPDERIERSESILKSESTSRKSGKKRKMTAENGRTRKGSYAKKTVLSYNSTEDKPNSQPRRVHRSKKARNVERDRAAFKGDNSPPYHHRKPTSKQTNCTESDALSDDSLDDEDDHMQHRRNFNIDNDVVSNDTMDCDSDWQQREANSSQDVEDMERDAISEDSSDVGSLQLQKKTSEGKHTKCISEDVISDDHMESSFQKQHRRIPKSRQGKYLTGKDIISDDQLELKMQKQRRRNPKSRQAKYLNEEDFASDDQLEGHYRRYQRRNPKGRQVKCVAEEDEMSGDQLEDHCQKLHTSFSRRKQDKGINRDVKNVMSDDQLEDHSLKQQRRIPKSRQNKHTYKEVMDDSAENNSHLLHRTPKRKPAKCVDEDDMNSDDEVEDDQQLRRTLRSKQSKPKTLQQMKQANSLQAKNQASRSIKRGSRVLVKSKTPQQIKQRNKQSSNSREFSLHMEEEEEGGPSTRLRKRATKAQESEGKLKYKQTKRNKVKTSTTAKVSVGHAKGKDGEADYQCDIDGCTMSFGSKQELLHHKRNICPVKGCGKKFFSHKYLVQHRRVHEDERPLKCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPGCGQTFRFVSDFSRHKRKTGHSAKKSRQ 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02075 765 MobiDBLite consensus disorder prediction 437 634 - -
Spst9g02075 765 ProSitePatterns Zinc finger C2H2 type domain signature. 704 726 IPR013087 -
Spst9g02075 765 FunFam Probable lysine-specific demethylase ELF6 729 758 - -
Spst9g02075 765 MobiDBLite consensus disorder prediction 209 228 - -
Spst9g02075 765 ProSiteProfiles Zinc finger C2H2 type domain profile. 672 701 IPR013087 -
Spst9g02075 765 Gene3D Classic Zinc Finger 619 672 - -
Spst9g02075 765 MobiDBLite consensus disorder prediction 566 585 - -
Spst9g02075 765 MobiDBLite consensus disorder prediction 380 403 - -
Spst9g02075 765 MobiDBLite consensus disorder prediction 369 412 - -
Spst9g02075 765 SUPERFAMILY beta-beta-alpha zinc fingers 688 730 IPR036236 -
Spst9g02075 765 ProSiteProfiles Zinc finger C2H2 type domain profile. 702 731 IPR013087 -
Spst9g02075 765 MobiDBLite consensus disorder prediction 534 559 - -
Spst9g02075 765 ProSitePatterns Zinc finger C2H2 type domain signature. 734 758 IPR013087 -
Spst9g02075 765 MobiDBLite consensus disorder prediction 437 469 - -
Spst9g02075 765 FunFam Probable lysine-specific demethylase ELF6 699 728 - -
Spst9g02075 765 ProSiteProfiles Zinc finger C2H2 type domain profile. 732 763 IPR013087 -
Spst9g02075 765 MobiDBLite consensus disorder prediction 152 254 - -
Spst9g02075 765 MobiDBLite consensus disorder prediction 332 351 - -
Spst9g02075 765 PANTHER ZINC FINGER PROTEIN ZIC AND GLI 524 757 - -
Spst9g02075 765 MobiDBLite consensus disorder prediction 229 243 - -
Spst9g02075 765 Gene3D Classic Zinc Finger 701 729 - -
Spst9g02075 765 Gene3D Classic Zinc Finger 673 700 - -
Spst9g02075 765 Gene3D Classic Zinc Finger 730 764 - -
Spst9g02075 765 SUPERFAMILY beta-beta-alpha zinc fingers 720 754 IPR036236 -
Spst9g02075 765 MobiDBLite consensus disorder prediction 281 320 - -
Spst9g02075 765 ProSitePatterns Zinc finger C2H2 type domain signature. 674 696 IPR013087 -
Spst9g02075 765 MobiDBLite consensus disorder prediction 152 178 - -
Spst9g02075 765 MobiDBLite consensus disorder prediction 586 620 - -
Spst9g02075 765 SMART c2h2final6 649 671 IPR013087 -
Spst9g02075 765 SMART c2h2final6 702 726 IPR013087 -
Spst9g02075 765 SMART c2h2final6 732 758 IPR013087 -
Spst9g02075 765 SMART c2h2final6 672 696 IPR013087 -
Spst9g02075 765 MobiDBLite consensus disorder prediction 477 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02075 Spst-Chr9 42240901 42243198 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02075 546 763 C2H2 Transcription Factor Family AT3G48430 53.975 7.27e-70 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Spst9g02075 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02075 - - gmx:100775813 1257.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02075 9 42240901 42243198 Spst9g02075 9 42240901 42243198 ECH
Spst9g02075 9 42240901 42243198 Spst3g04477 3 96350139 96361859 PCT