Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02074 ATGAGAGCCACGGAGAAGAAATCAGTGATAATGGGAGGGGGTTCCGAGGGAAACGCCGACGTTTTAGCGTGGCTCAAATCGATGCCGGTGGCGCCGGAGTACCGCCCGAGCGCGGCAGAGTTTCAAGATCCAATCGGCTACATATTCAAGATCGAGAAGGAAGCGTCCAAGTACGGCATCTGCAAAATCATCCCTCCCTTCCCTCCTCCCCCAAAGAAAACCGCCATCGCCAACCTCAACCGCTCACTCGCCGTTTCCGGTTCCACATTCACCACGCGCCAGCAGCAGATCGGCTTCTGCCCCCGCCGCCCCCGCCCCGTGCAGCGTCCTGTCTGGCAGAGCGGCGACCACTACACCTTCACCGAGTTCGAGTCCAAAGCCAAGTCTTTCGAGAAAGCGTACCTCAAACGCCACACTAGAAAGGGTTCGGGCCTAGGCCCGAGCCCGCTTGAGACCGAAACTCTCTTCTGGAAGGCCACGCTGGATAAACCCTTTTCCGTGGAATATGCTAACGACATGCCGGGTTCTGCGTTCTCCCCTAAATGCCGCCACGCAGGGGATCCCACTTCCCTTGCGGACACTCCGTGGAACATGCGTGCTGTTTCTCGGGCTAACGGTTCGCTCTTGCGCTTCATGAAGGAGGAGATTCCGGGTGTTACTTCTCCCATGGTCTACGTCGCCATGCTCTTCAGCTGGTTCGCATGGCATGTCGAGGACCACGACTTGCACAGTTTGAACTACCTCCACATGGGTGCCAGCAAGACCTGGTATGGTGTCCCCCGCGACGCCGCAGTTGCTTTTGAGGAGGTGGTTAGGGTTCACGGCTACGGTGGAGAGATTAATCCGCTGGTGCCTCAGTTCACGCGATTGCTTGAAGGGTGTGGTTGTATTGTGTTCTGCTCTCACAATCATGAACTTAGTTCAAGCATTATTGTTGAAAACAAGGTGTTCCATGCTGCAGTTTTGCTGTGCCCTGGGAGTCCCCGTTATGCAGAGACAGGAAAGTTAGTACAAAATGCTGGGGAATTTGTTGTGACGTTTCCAAGAGCCTATCACACAGGGTTTAGTCATGGGTTTAATTGTGGAGAGGCAGCAAACATTGCAACACCTGAGTGGTTGAGGGTTGCGAAAGATGCTGCCATTCGAAGGGCTTCACTAAATTATCCTCCCATGGTTTCACATTTCCAGTTACTTTATGACCTTGCCTTAGCTTTGTGTTCTAGAATTCCTGCGAGCATCAATGCTGAACCTCGCAGTTCTCGTCTTAAAGATAAGAAGAAGGGTGAAGGAGACACTGTAATCAAGGAACTATTTGTCCAAGACGTGTTACAGAACAATGATCTGCTTCATATACTGGGAAAAGGATCTGCTGTAGTACTTCTTCCTCGTAGCTCAGTTGACATTTCTGTTTGCTCTAAACTACGTGTTGGATTCCAGCAATCCATCAATGTAAGCAATTCTGAGGGAATGCATTCCTCAAAAGGTTTTGTTTCTGATGATCTGGTATTCAACAGGAGTCATGGAATCAAGCAAGAAAAAAGTTTCTATTCTGTGAAAGACAAGTTTAGTACGATGTATGAAAGGAACAGGATTTCCTCTTTTGATGTTAATGGTAACATAAACACTTCAAGTTCTAAGCCACTTCAGAGGGACACGGAAGGAGAAACTAGTGAAGATGGATTGTCAGATCAGAGACTGTTTTCATGTGTCACGTGTGGAATATTAAGCTTTTCCTGTGTTGCTATTGTACAGCCTAAAGATCCAGCAGCTAGATATCTCATGTCAGCTGATTGCAGCTTCTTTAATGATTGCGTTGTTGGTTCTGGAGTATCTAACAGTAAATTTACTAGTGCCCCTGAAGAAGCAACTATTCCTGAGCCAAATTTGTATACAGGCAAGTTTATAAGATGGATGAAAAAAGAGGTCCAAGATGGTATACCAGATGTTTCTGTTCAATCTTATCGGGATGGTTTGAATACTGAAAGTAAAAATGGAAATACAGCTCTTGCACTATTGGCTTCAGCATATGGAAATTCTTCTGACTCTGAGGAAGACCAGATTTCGGTTGATGGTCATGAAACAAATGTGGTAAACTCTGCTTCAGAAAGTTTACTTTCTCATACTCAAGATTCCTATGCTACTCCCAGGTCTCCACTTGATAGGGGAGATAACATTCCTTCAAAGAGTGCCAGTTGTGAGGATTTTATGCATCGTAGATTTGAGTGCAATTTAAGTCATCAATCTTTAGACCACTCTTCAAAGAAACAGGATTATAACATCACATCAGGGCTCACATTTGAAAATATGAGGACGATGCCTAATTCCACCTCCATTTGCTCCCAGGAAGCCCATGATGCTGAAAGGTCATTGCCTAACAAGTCTGTGGTTCCCTTTGATAATAAAAATGCTTCAATGGTGCTACAATCTGATGAAGATTCATCCAGAATGCATGTGTTTTGTCTAGAGCATGCTGCAGAAGCAGAGAAGCAACTTTGCCCAATAGGTGGAGCCCAGATATTTCTCCTATGTCATCCAGGTAGACAGATTAAACTGGTTAAGAAACAAGGGAACTGTGGTTATGAAGAACGAGAGTCTAGTGATGGAAGTTATGTCAGTGGCACCACATCTTACAAAGTGGTTTAG 2643 0.4642 MRATEKKSVIMGGGSEGNADVLAWLKSMPVAPEYRPSAAEFQDPIGYIFKIEKEASKYGICKIIPPFPPPPKKTAIANLNRSLAVSGSTFTTRQQQIGFCPRRPRPVQRPVWQSGDHYTFTEFESKAKSFEKAYLKRHTRKGSGLGPSPLETETLFWKATLDKPFSVEYANDMPGSAFSPKCRHAGDPTSLADTPWNMRAVSRANGSLLRFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYLHMGASKTWYGVPRDAAVAFEEVVRVHGYGGEINPLVPQFTRLLEGCGCIVFCSHNHELSSSIIVENKVFHAAVLLCPGSPRYAETGKLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLRVAKDAAIRRASLNYPPMVSHFQLLYDLALALCSRIPASINAEPRSSRLKDKKKGEGDTVIKELFVQDVLQNNDLLHILGKGSAVVLLPRSSVDISVCSKLRVGFQQSINVSNSEGMHSSKGFVSDDLVFNRSHGIKQEKSFYSVKDKFSTMYERNRISSFDVNGNINTSSSKPLQRDTEGETSEDGLSDQRLFSCVTCGILSFSCVAIVQPKDPAARYLMSADCSFFNDCVVGSGVSNSKFTSAPEEATIPEPNLYTGKFIRWMKKEVQDGIPDVSVQSYRDGLNTESKNGNTALALLASAYGNSSDSEEDQISVDGHETNVVNSASESLLSHTQDSYATPRSPLDRGDNIPSKSASCEDFMHRRFECNLSHQSLDHSSKKQDYNITSGLTFENMRTMPNSTSICSQEAHDAERSLPNKSVVPFDNKNASMVLQSDEDSSRMHVFCLEHAAEAEKQLCPIGGAQIFLLCHPGRQIKLVKKQGNCGYEERESSDGSYVSGTTSYKVV 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02074 880 MobiDBLite consensus disorder prediction 701 715 - -
Spst9g02074 880 Pfam jmjN domain 32 65 IPR003349 -
Spst9g02074 880 SMART cupin_9 190 384 IPR003347 -
Spst9g02074 880 MobiDBLite consensus disorder prediction 537 559 - -
Spst9g02074 880 ProSiteProfiles JmjC domain profile. 190 384 IPR003347 -
Spst9g02074 880 SUPERFAMILY Clavaminate synthase-like 187 402 - -
Spst9g02074 880 Gene3D Cupin 24 388 - -
Spst9g02074 880 ProSiteProfiles JmjN domain profile. 31 72 IPR003349 -
Spst9g02074 880 SMART JmjN_1 30 71 IPR003349 -
Spst9g02074 880 PANTHER LYSINE-SPECIFIC DEMETHYLASE 23 845 - -
Spst9g02074 880 MobiDBLite consensus disorder prediction 701 730 - -
Spst9g02074 880 Pfam JmjC domain, hydroxylase 223 366 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02074 Spst-Chr9 42233792 42240181 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02074 191 593 C2H2 Transcription Factor Family AT5G04240 40.049 2.69e-83 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Spst9g02074 JmjC 7.9e-25 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02074 - - gmx:100775271 1342.79