Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02070 ATGATTGCATATACATTAGTACAAATCCCCAACCCGATACAGTTCCGATTTGGGATTTTTGGAATCTCTCAGCCGCCAACGACTCCGAATTTCGCCTCCTCCTCTGTCTTGGCTCGAGATCAGAGCCAAGCACAAGCACGGGATAACAATCCGACTCAGATTTTCTCCGTCACTCTCTCTTTAGGTTCATATCGTGTTGTTGTTGTTGTTGTGCGTTTGCTGTTTAGTTTTGCTTATTGCACTGGTTTTGAAGCGCTTGTGACGCGTCGTGCTCTGTTTATATTCGTGTTAGTTGATGGCGTAATGGCATCAACTGCAGGGTTTCTAACCGATGAACACATAGAGATTATGGAAAAAGCGAGTCAGAATGTGAAGAGTTTCTCTTCCTCGCCGATATCCCCATCATCCTTGCTTGCTGGACATAATAATAATCAGGTGAGAGCTCCATCAGTGGATGGTAAGGCACAATCTACTGAGCATGCTGCCAGTATTGAGCGCCGGTGGCACAGTGGAAAGTTTATACCGTACGACGAGTACGGTGCTGCTCGTCAGGGCACTTGGGAAGATTTGCTCGATAAATATGGCGATCCAAATTACGATAATGGCGAGGAACCTTATCAACTGGTTGGATCCACCGTTACTGATCCTTTAGATGAATTAAATGAAGCAGCAGTATCCATCTTAGAGAAATATTTCAGAATTGGGGATGTGGAATTCGTTATATATAATTTCGAAGATCTTCAATCAAAGATGGACTTGGCTGCATATTATCCATACTTGGTTAAACGTCTTGTATCCATGGCCATGGTCAGGCATAATAAAGAGAGAGAGATGGCTTCAGTTCTGCTTTTAGAAATGGAAATTTATCTTCTCAGTTCTGAACAGATTGAAGATGGGATTTTTATGCTCATTGAATCTGCTGATGATCTGGCATTGGACGTACCGGATGCTGTTGATATGCTTGCCTTATTTCTGACACGTGCTGTTATTGATGAGCTCATTCCTCGAGCCTTTCTTGCCAAGGCCGAGAAAGCTCTTCCAGAATCATCGAAGGGAATTCAAGCAATCCAAACTGCTGTAAAACTTTATCTCTCTGCTCCGCACCATGCAGACCTTGTGGAGATGCGATGGGGTTGTAACTTTTACCTCACTGTTGAAGATGTGAAAAAGAGGATGGTTGATTTTCTCAGAGTATATGTGCAAAATGGTTGTGTGTTTGGAGCCTGTGGTTGTATATTTCAATTGGAGGAGATTTCATACTTCCATCATGAGTTTGTGAGAAGGGCTTTGGTGCTTGCCATGGAGATCCGTTCAGCAGAAACTCCACTGTTGGATCTAATACAAGTAGCAGTAACGGAAGGATTCACTACTTCCAGCCAAGTAGTGAAAGGGTTTTCTCGTCTGGAAGAAGTCATTGATGATCTTGCTTTTGATATTCCATCAGCTCAAACCATTTTTCAGACAATGGTACATAAGGCAATATTAAACGGGTCGCTTGATGCTTCATTCAAACCATCTAGTGAAGATAGGTACTTCGTAGTTGAAGATGAAAAGGTGAGCAAATACAAAAAAGAGATTGCCGCAATAATTCATCAATATTTTCTCTCGGGTGACATTCCTGAACTAATTCGAAGTCTGGAAGATCTTGGGACACCTGAGTACAACCCAATATTTTTGAAGAGGCTAATAACTGTCGCCATGGACAGAAAGAAAAGAGAAAAGGAAATGGCATCAGTGCTGCTGTCTGCTCTTCATATGGAGATATTCTCAACAGAGGATATAGCTAATGGTTTTGTCTTGCTTCTGGAAAGTGCAGAAGATACAGCACTAGATAAAACCGATGCATCAATTGAGCTTGCTATTTTTCTTGCTCGAGCTGTGATTGATGATGTATTGGCTCCTCTGAAATTAGAGGAAATGAAGAGCAGGTACAACCCATATTCCAGTGGAGGTGAAACTGCGTGGATGGCTCAACAACTTGTGTCTGCTCCGCATGCTGGTGAGAGAATATTAAGATGTTGGGCTGGTAGGACTGGATGGGCCGTTGAAGATGCCAAGGACAAGATCATGAAGGTCTTGGAGGAGTACGAGAGCGGTGGTGTTGTGAGTGAGGCATGCGAGTGTATTCGGGAGCTAGGAATGGCTTTCATGAACCACGAGGTTGTTAAAAAAGCTTTGGTTATGGGCATGGAGAAGAAGAATGATAGGATGCTGGATCTTCTGCAGGAGTGCTTTAGTGAAGGCCTGATCACCATCAATCAGATGACAAAAGGGTTCACCAGAATGAAGTATAGCCTTGACCATCTTGCTCTGGACATTCCAAACGCCACTGAGAAGTTCAGCTTGTATTTGGATCATGCGCTGAACAAGGGCTGGCTCCTACCATCATTTGATTCCAATGTCACCAATGTCTAA 2415 0.4323 MIAYTLVQIPNPIQFRFGIFGISQPPTTPNFASSSVLARDQSQAQARDNNPTQIFSVTLSLGSYRVVVVVVRLLFSFAYCTGFEALVTRRALFIFVLVDGVMASTAGFLTDEHIEIMEKASQNVKSFSSSPISPSSLLAGHNNNQVRAPSVDGKAQSTEHAASIERRWHSGKFIPYDEYGAARQGTWEDLLDKYGDPNYDNGEEPYQLVGSTVTDPLDELNEAAVSILEKYFRIGDVEFVIYNFEDLQSKMDLAAYYPYLVKRLVSMAMVRHNKEREMASVLLLEMEIYLLSSEQIEDGIFMLIESADDLALDVPDAVDMLALFLTRAVIDELIPRAFLAKAEKALPESSKGIQAIQTAVKLYLSAPHHADLVEMRWGCNFYLTVEDVKKRMVDFLRVYVQNGCVFGACGCIFQLEEISYFHHEFVRRALVLAMEIRSAETPLLDLIQVAVTEGFTTSSQVVKGFSRLEEVIDDLAFDIPSAQTIFQTMVHKAILNGSLDASFKPSSEDRYFVVEDEKVSKYKKEIAAIIHQYFLSGDIPELIRSLEDLGTPEYNPIFLKRLITVAMDRKKREKEMASVLLSALHMEIFSTEDIANGFVLLLESAEDTALDKTDASIELAIFLARAVIDDVLAPLKLEEMKSRYNPYSSGGETAWMAQQLVSAPHAGERILRCWAGRTGWAVEDAKDKIMKVLEEYESGGVVSEACECIRELGMAFMNHEVVKKALVMGMEKKNDRMLDLLQECFSEGLITINQMTKGFTRMKYSLDHLALDIPNATEKFSLYLDHALNKGWLLPSFDSNVTNV 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02070 804 FunFam programmed cell death protein 4 511 665 - -
Spst9g02070 804 Gene3D - 376 510 - -
Spst9g02070 804 Gene3D - 672 802 - -
Spst9g02070 804 SUPERFAMILY ARM repeat 520 676 IPR016024 -
Spst9g02070 804 ProSiteProfiles MI domain profile. 521 642 IPR003891 -
Spst9g02070 804 Gene3D - 513 663 - -
Spst9g02070 804 Gene3D - 212 365 - -
Spst9g02070 804 SUPERFAMILY ARM repeat 218 379 IPR016024 -
Spst9g02070 804 ProSiteProfiles MI domain profile. 684 803 IPR003891 -
Spst9g02070 804 Pfam MA3 domain 523 632 IPR003891 -
Spst9g02070 804 Pfam MA3 domain 686 793 IPR003891 -
Spst9g02070 804 Pfam MA3 domain 390 500 IPR003891 -
Spst9g02070 804 Pfam MA3 domain 223 335 IPR003891 -
Spst9g02070 804 SMART ma3_7 220 335 IPR003891 -
Spst9g02070 804 SMART ma3_7 522 633 IPR003891 -
Spst9g02070 804 SMART ma3_7 685 794 IPR003891 -
Spst9g02070 804 SMART ma3_7 388 500 IPR003891 -
Spst9g02070 804 SUPERFAMILY ARM repeat 681 801 IPR016024 -
Spst9g02070 804 PANTHER PROGRAMMED CELL DEATH 4 107 798 IPR039778 GO:0045892
Spst9g02070 804 ProSiteProfiles MI domain profile. 387 509 IPR003891 -
Spst9g02070 804 SUPERFAMILY ARM repeat 384 503 IPR016024 -
Spst9g02070 804 ProSiteProfiles MI domain profile. 219 344 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02070 Spst-Chr9 42066610 42071085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02070 688 780 Eukaryotic Initiation Factors Gene Family AT4G30680 30.208 3.10e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02070 - - gmx:100815729 922.539