Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02064 ATGGCCTTCGTAGCGTTCATCTACTCCTCCAGGTGTACGGAGGAGGATATGGACAAGTACGGAATGCACCTTTTGGCACTGTCGCATGTGTACTTGGTGACGCAGCTGAAGCAGCGGTGTATCAAGGGACTGAGCGAGCGCGTGAACACGGAGAACGTAGTGGACGTGTTGCAACTGGCGCGGCTCTGCGACGCACCGGATCTTTATCTCAAGTGCGTTAAACACCTCACGAACCATTTTAAAGTTGTGAAGGAAACCGAGGGATGGAGATTCCTGCAGAACCACGACCCCTGCCTCGAACTCGACATTCTCCGCTTAATGGAAGAACACGAAAAGGTAATAATAGCTATCGCTATCACTGATCAGTGTGATGTGAGATCTGGAATAAGAATTGTTGTTGTGATTAAATTGGTTGTGTTCTGCGGACAGAGGAAGAGGAAGACTAGGAAGCGGAGGGAGGAGGGGAGGTTGTACGCGGAGCTGAGCGAGGCGATGGAGTGTTTGGAGCACATATGCACGGAGGGGTGCACGGACGTGGGGCCGTACGATGTGGAGGTTGGGCGAGGGAAAGGACCGTGCTCGAAGTTCGGCACGTGTCAGGGTGTGCAGGTTTTGATCCGACACTTCGCCACCTGCGAGAGGGTGAAGGGAGGGTGTTTGCGGTGTAAACGCATGTGGCAGCTCTTCAGACTCCACTCCTCCATTTGTCTGCGACATGATTCTTGCAAGGTTCCTCTCTGCAGGCAAATTAGATTAAGAATGGAGCAAGAGAACAAGAAAGGTGACGCAAGGTGGCAACTACTAGTGAGGAAAGTGGCCTCGGCCAAAGCAATGTCTTCCTTGGCATTGCCAAAGAGGAAGCGGGTTGTGGAAATTAGTGCAGAGGGACCATAA 894 0.5224 MAFVAFIYSSRCTEEDMDKYGMHLLALSHVYLVTQLKQRCIKGLSERVNTENVVDVLQLARLCDAPDLYLKCVKHLTNHFKVVKETEGWRFLQNHDPCLELDILRLMEEHEKVIIAIAITDQCDVRSGIRIVVVIKLVVFCGQRKRKTRKRREEGRLYAELSEAMECLEHICTEGCTDVGPYDVEVGRGKGPCSKFGTCQGVQVLIRHFATCERVKGGCLRCKRMWQLFRLHSSICLRHDSCKVPLCRQIRLRMEQENKKGDARWQLLVRKVASAKAMSSLALPKRKRVVEISAEGP 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02064 297 FunFam BTB/POZ and TAZ domain-containing protein 2 49 114 - -
Spst9g02064 297 CDD BACK 49 92 - -
Spst9g02064 297 Gene3D TAZ domain 150 275 IPR035898 -
Spst9g02064 297 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 2 287 IPR044513 -
Spst9g02064 297 SUPERFAMILY TAZ domain 156 256 IPR035898 -
Spst9g02064 297 SMART TAZ_2 155 248 IPR000197 -
Spst9g02064 297 Pfam TAZ zinc finger 162 247 IPR000197 -
Spst9g02064 297 FunFam BTB/POZ and TAZ domain-containing protein 2 151 276 - -
Spst9g02064 297 Gene3D Potassium Channel Kv1.1; Chain A 1 88 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02064 Spst-Chr9 41632787 41637415 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Spst9g02064 zf-TAZ 3.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02064 - - pvu:PHAVU_009G170600g 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02064 9 41632787 41637415 Spst9g02064 9 41632787 41637415 ECH
Spst3g04481 3 96403965 96406949 Spst9g02064 9 41632787 41637415 PCT