Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02049 ATGGCTCACAAAACTCGCTTATTGCTGTTTTCTCTGTTTCTGTTCTTAATCTCCATCAATGCCAAGCTTCAACTCTACCCTTCAGATTTCAAGGCTCTCTTAGCCCTGCGAAAGGACCTCGGAGTCAACGGTCAACTGGACGCAAATGAGGCATGTTACGCGGAGGGTGTGTTCTGCGAGCGAAGGCTCTCCGACAAGGAAACCTACGTGCTTCGAATCACCAGGTTGGTGTTCAAATCCAAGCATCTCAACGGTGTCTTGTCCCCCGCCATAGGATCCCTCACGGAGCTCAAACAACTCTCTCTCTCCGACAACCAACTCGTTGACCGAATCCCTCCCCAAATCGTTGACTGCCGCAAGCTCGAAATTCTCGACCTTGCTAACAATCTCTTCTCCGGCGAGGTCCCCTCCGAAATCTCCTCTCTCACGCGCCTCCGCGCGTTGGACATCTCCTCCAACAAACTCTCTGGCAACCTCAACTTCCTCAAGTACTTCCCCAACCTCGAAACCCTCTCCGTCGCCGACAACCTCTTCACCGGAAGGGTCCCCTCTTCCGTTCGCTCCTTCCGCAACCTCCGCCACTTCAACTTCTCCGGCAACGGCTTCCTCGAATCCTCTCTCCGCTTCCAACATTCCTCCTCATCAGACACCGTTCTCTCCAGACGTTACCTTTCGGACGTTGGTGAAGCACCTTCTCCTGCACCTACCTCAAACAAGAGAAACGCCAAAGCTTCTCATGGTTCCCCTGCAGCGGCACCTGGTCCTTCATTTAACCACCGAAAACACAGGCACAGTAAGAGAAAGCTCGCTGGGTGGATTCTCGGGTTTTTGGCTGGGGCAGTGGCTGGAACCTTATCAGGGTTCGTGTTTTCTCTCTTGTTTAAACTGGCTTTGGCACTGATCAAAGGAAGAGGAAAGAGAGTGGGTCCCGATATTTATAGTCCGTTTATTAAGAAAGCAGAGGATTTGGCCTTCTTGGAGAGAGAAGAAGGAATCACTTCGTTGGAAATCATTGGACGCGGTGGCTGTGGGGAGGTTTACAAGGCTGAGTTACCAGGAAGCAATGGCAAACTGATTGCTATAAAGAAAGTTGTTCAACCTCCTAAAGATGGTGCTGAATTAGCAGAGGAAGATAGCAGGCTTCTGCATAAGAAAATGAGGCAAATTCGGTCTGAGATTAACACTGTGGGAAAAATTAGACACCGAAACCTTCTGCCTCTGTTGGCGCATGTTTCTAGGCCTGATTGCCACTACCTGGTGTATGAATTCATGACGAATGGTAGCTTGCAGGATATGCTGAGCAAGGTTGAAAGGGGTGAGGCAGAGTTGGATTGGTTGGCGCGGCATAGAATTATGCTTGGTGTTGCTTCTGGACTTGAATACCTTCACATGAGTCACGACCCTCGCATCATTCATAGGGATCTCAAGCCCGGAAATATTCTTCTTGATGATGACATGGAAGCTCGCATTGCTGATTTTGGACTCGCTAAGGCAATGCCAGATTACAAGACTCACATAACCACCTCCATTGTGGCTGGCACTGTGGGGTATATTGCTCCTGAGTATCACCAGATACTTAAGTTCACTGATAAGTGTGATATCTACAGCTTTGGGGTTATCCTTGGGGTGTTGGTGATTGGCAAGCTTCCTTCTGATGAGTTCTTTCAGCACACCGAAGAGATAAGTTTGGTCAAGTGGATGAGGAAGGTTTTGAGTTCTGAGAATCCTAAGGAGGCTGTTGATTCGAAGCTGCTGGGGAATGGGTATGAGGAGCAGATGCTTCTTGTGTTGAAGATTGCATGCTTTTGCACCATGGATGATCCCAAGGAGAGGCCAAACAGTAAGGATGTTAGGTGCATGCTTTCACAGATCAAACCCTGA 1881 0.4918 MAHKTRLLLFSLFLFLISINAKLQLYPSDFKALLALRKDLGVNGQLDANEACYAEGVFCERRLSDKETYVLRITRLVFKSKHLNGVLSPAIGSLTELKQLSLSDNQLVDRIPPQIVDCRKLEILDLANNLFSGEVPSEISSLTRLRALDISSNKLSGNLNFLKYFPNLETLSVADNLFTGRVPSSVRSFRNLRHFNFSGNGFLESSLRFQHSSSSDTVLSRRYLSDVGEAPSPAPTSNKRNAKASHGSPAAAPGPSFNHRKHRHSKRKLAGWILGFLAGAVAGTLSGFVFSLLFKLALALIKGRGKRVGPDIYSPFIKKAEDLAFLEREEGITSLEIIGRGGCGEVYKAELPGSNGKLIAIKKVVQPPKDGAELAEEDSRLLHKKMRQIRSEINTVGKIRHRNLLPLLAHVSRPDCHYLVYEFMTNGSLQDMLSKVERGEAELDWLARHRIMLGVASGLEYLHMSHDPRIIHRDLKPGNILLDDDMEARIADFGLAKAMPDYKTHITTSIVAGTVGYIAPEYHQILKFTDKCDIYSFGVILGVLVIGKLPSDEFFQHTEEISLVKWMRKVLSSENPKEAVDSKLLGNGYEEQMLLVLKIACFCTMDDPKERPNSKDVRCMLSQIKP 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02049 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Spst9g02049 626 SUPERFAMILY L domain-like 71 205 - -
Spst9g02049 626 SUPERFAMILY Protein kinase-like (PK-like) 324 621 IPR011009 -
Spst9g02049 626 Gene3D Transferase(Phosphotransferase) domain 1 424 625 - -
Spst9g02049 626 Gene3D Phosphorylase Kinase; domain 1 324 423 - -
Spst9g02049 626 Pfam Leucine rich repeat 96 155 IPR001611 GO:0005515
Spst9g02049 626 ProSiteProfiles Protein kinase domain profile. 332 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02049 626 Gene3D Ribonuclease Inhibitor 26 234 IPR032675 -
Spst9g02049 626 FunFam Leucine-rich repeat receptor protein kinase EMS1 68 162 - -
Spst9g02049 626 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 70 625 - -
Spst9g02049 626 MobiDBLite consensus disorder prediction 227 261 - -
Spst9g02049 626 FunFam Leucine-rich repeat receptor-like protein kinase 424 626 - -
Spst9g02049 626 FunFam leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 319 423 - -
Spst9g02049 626 SMART serkin_6 332 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02049 626 Pfam Protein kinase domain 334 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02049 Spst-Chr9 41179206 41181086 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02049 7 625 Receptor kinase-like Gene Family AT2G31880 63.016 0.0 795
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Spst9g02049 Pkinase 4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02049 - - gmx:100811980 1032.32