Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02026 ATGGAATCTGGAGGTAGGTTCTACTCAGTTGATGAGTTCAGATTGGACCCCAAATGGCTGATTGATCCTAAGCATCTCTTTGTTGGGCCACAGATTGGGGAGGGAGCTCATGCCAAAGTCTATGAGGGAAAATATAAAAACCAGACTGTTGCTATTAAAATTGTACACAAGGGTGAGACTGCGGATGATATCGCCAAGAGAGAAGGGCGTTTCGCAAGGGAGGTGGCAATGTTGTCAAGAGTGCAACATAAGAACTTGGTGAAGGTGGGATTTTGGTTTAGGCTTTCACTGATTCTTATTCTTGTGTCTGTTTTTATCGGTGCCTGTAAGGAGCCTGTAATGGTGATAGTCACCGAGCTGCTATTAGGAGGAACATTGCGTAAGTATTTGCTAAACATGCGTCCCAAATGCTTGGATAGACATGTTGCCATTGGTTTTGCACTTGATATTTCACGCGCTATGGAGTGCCTGCATTCTCATGGGATCATCCACCGTGATCTTAAACCTGATAACTTGCTGTTAACTGAAGACCAGAAAACAGTCAAGCTAGCAGATTTTGGTTTAGCAAGAGAAGAGTCATTAACTGAGATGATGACAGCTGAAACAGGAACCTACCGCTGGATGGCTCCAGAGTTGTATAGTACTGTCACACTGAGGCAAGGGGAGAAAAAGCATTACAACCATAAAGTTGATGCTTATAGTTTTGCAATTGTGTTGTGGGAGCTCTTACACAACAAAGTTCCTTTTGAAGGCATGTCAAACCTTCAGGCAGCATATGCTGCAGCCTTTAAGAATGTAAGGCCAAGTGCAGAGAATCTTCCTGAGGAATTGGCTCTAATTCTTACTTCATGCTGGCAAGAGGACCCAAATACCAGGCCCAACTTCACCCAGATAATCCAAATGCTCCTTAATTATCTCTACACTGTTGCACCACCTGAACCCATGATTCCTTCAAGAATATTCAGTTCTGAGAACACTGTCTTGCCGCCAGAGTCACCGGGAACTAGCTCCTTAATGGCAAAACTTGATGACACTGGCGACACACCAAGAGCAAAGGACGAAGTCAAGCCTAACGGTTTTCTTTGCTGCTTTAGTCAGTGTTATTAA 1107 0.4399 MESGGRFYSVDEFRLDPKWLIDPKHLFVGPQIGEGAHAKVYEGKYKNQTVAIKIVHKGETADDIAKREGRFAREVAMLSRVQHKNLVKVGFWFRLSLILILVSVFIGACKEPVMVIVTELLLGGTLRKYLLNMRPKCLDRHVAIGFALDISRAMECLHSHGIIHRDLKPDNLLLTEDQKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELLHNKVPFEGMSNLQAAYAAAFKNVRPSAENLPEELALILTSCWQEDPNTRPNFTQIIQMLLNYLYTVAPPEPMIPSRIFSSENTVLPPESPGTSSLMAKLDDTGDTPRAKDEVKPNGFLCCFSQCY 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02026 368 SUPERFAMILY Protein kinase-like (PK-like) 17 330 IPR011009 -
Spst9g02026 368 ProSitePatterns Protein kinases ATP-binding region signature. 32 53 IPR017441 GO:0005524
Spst9g02026 368 FunFam serine/threonine-protein kinase HT1 123 322 - -
Spst9g02026 368 Gene3D Phosphorylase Kinase; domain 1 15 121 - -
Spst9g02026 368 Gene3D Transferase(Phosphotransferase) domain 1 123 311 - -
Spst9g02026 368 PRINTS Tyrosine kinase catalytic domain signature 156 174 IPR001245 GO:0004672|GO:0006468
Spst9g02026 368 PRINTS Tyrosine kinase catalytic domain signature 230 252 IPR001245 GO:0004672|GO:0006468
Spst9g02026 368 PRINTS Tyrosine kinase catalytic domain signature 273 295 IPR001245 GO:0004672|GO:0006468
Spst9g02026 368 PRINTS Tyrosine kinase catalytic domain signature 118 131 IPR001245 GO:0004672|GO:0006468
Spst9g02026 368 CDD STKc_MAP3K-like 32 302 - -
Spst9g02026 368 MobiDBLite consensus disorder prediction 327 352 - -
Spst9g02026 368 SMART serkin_6 26 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02026 368 MobiDBLite consensus disorder prediction 327 342 - -
Spst9g02026 368 ProSiteProfiles Protein kinase domain profile. 26 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02026 368 Pfam Protein tyrosine and serine/threonine kinase 29 302 IPR001245 GO:0004672|GO:0006468
Spst9g02026 368 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 21 302 - -
Spst9g02026 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02026 Spst-Chr9 39422321 39425632 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02026 9 368 MAP Kinase Kinase Kinase AT5G50180 77.778 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Spst9g02026 PK_Tyr_Ser-Thr 5.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02026 - - gmx:100796593 686.411