Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Spst9g02018 | ATGACTCTAGAAGAAATGGTTCTTCAAGTTCATCCATCATCATCACTTTTAAGGCAATCGCCAAACGAACCAAACACCAGTTACTTGGCCATTTTGTTCTTCTTGATCATAAGCCTCGTTTTTGTGCTTAACCAAAGAAGAAGAAGCAAGTCCAATTTGCCACCTTCCCCACCAAAACTACCCATAATTGGAAATCTTCATCAGCTAGGCACTCTCCCACACCGCTCTTTCCAAGCACTCTCTCGCAAGTATGGTCCTCTCATGTTTCTGCAATTAGGCCAAACTCCAACTCTTGTGGTTTCATCAGTTGATGTGGCCAAAGAAATATACAAAACCCACGATGTTGCTTTCTCCAATAAGCCTCAGACCACAGCCGTGAAAATCATCATGTATGGCTGCATGGACGTGGCTTTTGCACCCTACGGAGAAGAGTGGAGACAGAAAAGGAAGATATGTGTTCTTGAGCTTCTTAGCATAAAAAGGGTGCAATCCTTTCAGTCAATTCGAGAAGAAGAAGTTACAGCGATGCTTGGTGCCATACGTGCAGCATGCAGCGCAAGTAAAAGGCCTTCTTGCGTGAATCTGAGTGAGATGCTGATTGAAACCTCGAACAACATAATGTCTAGATGTATTCTTGGACAAAAGTATGATACCCCAGATGGTAGTATCAGCTTTGGAGAGCTAGGAAGGAAGATGATGAAACACTTGGCCACTTTCACTGTGGGAGATTACTTTCCTTCGTTAGGTTGGATTGACGTTCTTACTGGCTACATACCAGAATTCAAGGCCACTTTCCATGCATTAGATGCTTTCTTTGATCAGTTAATTGACGAACGCAGGAGAATAATGAAGAGGGACAGTTACCAATCTCAGAACAAAGACTTCGTGGACACACTCCTTCAAATTCAAGATGGTGAAGGAAAGCATAATTTTCAGCTCACACATGATGACGTCAAGGCAATCCTAATGGACATATTTGCTGGAGGAAGTGATACTACTTCAACACTTCTGGAATGGATATTTGCGGCGCTCTTGAATAATCCTGATACCATGAAGAGAGCCCAAGAAGAAGTAAGAAGAGTTGTTGGGAATAAATTAAAAGTGGATGAAAATGATTTAAATCAAATGAATTATCTGAAATGTGTAGTGAAAGAAACTCTGAGGTTATATCCACCTGCTCCTCTATTGATACCCAGAGAAACTTTATCTGATGTGAAAGTCAAAGGTTTTGATATTCCATCCAAAACAAGAGTGTTTGTGAATGCATGGGCGATTCAGAGGGACCCTGAAATTTGGAACAGGCCTGAAGAGTTCCTTCCGGAGAGATTTGAAAATCAGACAGTAGTGGACTTTAGAGGAAATGATTTTCAGTTGATTCCCTTCGGTTCTGGGAGAAGGGGGTGCATTGGAATTTCATTTGCACTTGCTTCCACTGAGCTTATGCTTGCTAATCTCCTCTACTGGTTTGATTGGAAGATTCCTGAGAATGGTGCACCAATGCAAGATGTAGATATGAGTGAGATTTGGGGACTCACTGTCATCAAGAAAGTACCACTTCATCTTCAACCTCAATTACACTCGTTTGGACATAAACCTTGA | 1599 | 0.4178 | MTLEEMVLQVHPSSSLLRQSPNEPNTSYLAILFFLIISLVFVLNQRRRSKSNLPPSPPKLPIIGNLHQLGTLPHRSFQALSRKYGPLMFLQLGQTPTLVVSSVDVAKEIYKTHDVAFSNKPQTTAVKIIMYGCMDVAFAPYGEEWRQKRKICVLELLSIKRVQSFQSIREEEVTAMLGAIRAACSASKRPSCVNLSEMLIETSNNIMSRCILGQKYDTPDGSISFGELGRKMMKHLATFTVGDYFPSLGWIDVLTGYIPEFKATFHALDAFFDQLIDERRRIMKRDSYQSQNKDFVDTLLQIQDGEGKHNFQLTHDDVKAILMDIFAGGSDTTSTLLEWIFAALLNNPDTMKRAQEEVRRVVGNKLKVDENDLNQMNYLKCVVKETLRLYPPAPLLIPRETLSDVKVKGFDIPSKTRVFVNAWAIQRDPEIWNRPEEFLPERFENQTVVDFRGNDFQLIPFGSGRRGCIGISFALASTELMLANLLYWFDWKIPENGAPMQDVDMSEIWGLTVIKKVPLHLQPQLHSFGHKP | 532 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Spst9g02018 | 532 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 461 | 470 | IPR017972 | GO:0005506|GO:0016705 | |
| Spst9g02018 | 532 | Gene3D | Cytochrome P450 | 39 | 529 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g02018 | 532 | SUPERFAMILY | Cytochrome P450 | 54 | 522 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g02018 | 532 | PANTHER | CYTOCHROME P450 71B11-RELATED | 37 | 523 | - | - | |
| Spst9g02018 | 532 | FunFam | Cytochrome P450 83B1 | 41 | 522 | - | - | |
| Spst9g02018 | 532 | CDD | CYP71-like | 83 | 519 | - | - | |
| Spst9g02018 | 532 | Pfam | Cytochrome P450 | 54 | 502 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g02018 | 532 | PRINTS | E-class P450 group I signature | 421 | 445 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g02018 | 532 | PRINTS | E-class P450 group I signature | 317 | 334 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g02018 | 532 | PRINTS | E-class P450 group I signature | 380 | 398 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g02018 | 532 | PRINTS | E-class P450 group I signature | 337 | 363 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g02018 | 532 | PRINTS | E-class P450 group I signature | 81 | 100 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g02018 | 532 | PRINTS | E-class P450 group I signature | 105 | 126 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g02018 | 532 | PRINTS | E-class P450 group I signature | 202 | 220 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g02018 | 532 | PRINTS | E-class P450 group I signature | 458 | 468 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g02018 | 532 | PRINTS | E-class P450 group I signature | 468 | 491 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g02018 | 532 | PRINTS | P450 superfamily signature | 468 | 479 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g02018 | 532 | PRINTS | P450 superfamily signature | 381 | 392 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g02018 | 532 | PRINTS | P450 superfamily signature | 459 | 468 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g02018 | 532 | PRINTS | P450 superfamily signature | 328 | 345 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Spst9g02018 | Spst-Chr9 | 39210075 | 39211920 | Dispersed/Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Spst9g02018 | 45 | 520 | Cytochrome P450 | AT3G48310 | 44.025 | 1.85e-142 | 418 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Spst9g02018 | K20617 | - | gmx:100792382 | 650.973 |