Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02010 ATGCCGCTGGATTCCTCCGAGCAAGACCTTGACGATCCTGACATCGAATTCGTCGAGTTTGATCCTTCCGGTCGCTATGGTCGGTACAAGGAAGTTTTAGGAAAAGGGGCTTTCAAGAAAGTATATCGAGCGTTTGATGAGTTGGAAGGGATTGAAGTGGCTTGGAATCAGATTAAGCTGACGGATCTTTTGCGTAACTCTGAAGATTTCGAGCGACTTTATTCGGAGGTTCATTTGCTCAAGACTTTGAAGCATAAGAATATAATTAAGTTTTACAATTCATGGATTGACTCCAAGACCGAGAACATCAACTTCATTACTGAAATTTTCACCTCCGGAACGTTGCGCCAATACCGGAAGAAACATAAAAATGTTGATTTGAGAGCTTTGAAGAAATGGTCTAAGCAGATTCTGGAAGGCCTTTTGTATCTTCACAGTAATGATCCTCCTATCATTCATCGTGACCTGAAGTGTGATAACATTTTTGTCAACGGGAATCAAGGGGAGGTGAAAATTGGTGATTTAGGATTGGCGGCTATCCTCCAGAAGGCCAATTCAGCACACAGTGTTATAGGAACTCCTGAGTTCATGGCCCCAGAACTTTACGAAGAGGAATACAATGAGCTTGTTGACATATATGCTTTTGGTATGTGCTTGCTAGAGTTGGTAACAGTTGAGTACCCCTATGTTGAATGTGCCAATGCTGCTCAAATATACAAGAAAGTGACATCTGGAATTAAGCCAGCATCGTTGGCAAAAGTGACAAATCCTGAAGTTACAGCATTCATTGAAAAGTGTATTGCCCATGTATCTGAACGGTTGTCTGCAAAGGAACTCTTGATGGATCCCTTCCTTCAGTCAGATTATGATAATGAAACTGTTGGCCGATCTTCAAGATCTCAAACCCATCATTCGGGAAATATTTCCCAAAATCAAGCTCTTGCTGTGGATACTTCTCTTGAGGCAAGTAGGGAATTCACGGTGGAAGGTCAGAGGAGAGATAATAATACAATATTTTTAAAATTGCGAATTGCAGATTCCTCAGGTCATATTCGGAATATCCACTTTCCTTTTGACATCGAAGCAGACACTTCAACCTCTGTTGCTAGTGAAATGGTTGAGGAGTTGGAACTTACTGATCAAGATGTTACAACTATTGCTAGGATGATTGACTCAGAAATTCGGTATCACATTCCTAATTGGAATGTCAGTGAAATTCCTGTTCACAGATATAGTCAAGATTCAGGCTATATCTCTGAAATTAGGCCAGATGCCTCTCCTTCTGCCAGCAGTCTTACATTAGAAACATTACCTTCAGGTCGAAAGTACTGGTCAGACTCACCAAGGGGAGTTGGTGGAAACTCTCCATCTCGTCCTCTTACTTCAAAATCTTATTTTGCAGCGGATGCAGACGCCGAGGATGGCAGCCCGGATGGAAATGGTGATGTTTCTGCGGATGATCGTCTTGGTGATTGTAGTGCTGAGATTGTTGATTCCCCTTCCAGCGGGAGAAGTAGTAAATCAGGAGCAACCAGTGAAAAATCTCTGAAAGAAATATCTGGAAGCGTGGAAGATTCGGAAACAGAATACATCAATCACATGGCAAGAAAACTGGAGAATTTGTTGGTTAAACAGAGAGAGGAGTTAGATGAACTGAAGAGGAAGCACCAATTAGCTGTCTCGGATCTTTTGAAGGAACTTTCTCCAGAAATTAGCCAGAAGGTTCTAAATATATGCAACCTACAGATACCTGGCGGTCAAATGTAG 1767 0.4188 MPLDSSEQDLDDPDIEFVEFDPSGRYGRYKEVLGKGAFKKVYRAFDELEGIEVAWNQIKLTDLLRNSEDFERLYSEVHLLKTLKHKNIIKFYNSWIDSKTENINFITEIFTSGTLRQYRKKHKNVDLRALKKWSKQILEGLLYLHSNDPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQKANSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTVEYPYVECANAAQIYKKVTSGIKPASLAKVTNPEVTAFIEKCIAHVSERLSAKELLMDPFLQSDYDNETVGRSSRSQTHHSGNISQNQALAVDTSLEASREFTVEGQRRDNNTIFLKLRIADSSGHIRNIHFPFDIEADTSTSVASEMVEELELTDQDVTTIARMIDSEIRYHIPNWNVSEIPVHRYSQDSGYISEIRPDASPSASSLTLETLPSGRKYWSDSPRGVGGNSPSRPLTSKSYFAADADAEDGSPDGNGDVSADDRLGDCSAEIVDSPSSGRSSKSGATSEKSLKEISGSVEDSETEYINHMARKLENLLVKQREELDELKRKHQLAVSDLLKELSPEISQKVLNICNLQIPGGQM 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02010 588 Gene3D - 336 412 - -
Spst9g02010 588 MobiDBLite consensus disorder prediction 443 462 - -
Spst9g02010 588 Gene3D Transferase(Phosphotransferase) domain 1 110 292 - -
Spst9g02010 588 FunFam Probable serine/threonine-protein kinase WNK3 336 427 - -
Spst9g02010 588 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02010 588 Coils Coil 535 566 - -
Spst9g02010 588 MobiDBLite consensus disorder prediction 498 517 - -
Spst9g02010 588 MobiDBLite consensus disorder prediction 493 526 - -
Spst9g02010 588 CDD STKc_WNK 25 285 - -
Spst9g02010 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Spst9g02010 588 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
Spst9g02010 588 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 340 394 IPR024678 GO:0004674|GO:0005524
Spst9g02010 588 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02010 588 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Spst9g02010 588 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02010 588 SUPERFAMILY Protein kinase-like (PK-like) 29 286 IPR011009 -
Spst9g02010 588 MobiDBLite consensus disorder prediction 291 310 - -
Spst9g02010 588 FunFam Probable serine/threonine-protein kinase WNK1 12 108 - -
Spst9g02010 588 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02010 Spst-Chr9 39015279 39018659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02010 103 576 MAP Kinase Kinase Kinase AT3G48260 55.368 8.48e-169 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Spst9g02010 Pkinase 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02010 K08867 - gmx:100272204 857.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02010 9 39015279 39018659 Spst9g02010 9 39015279 39018659 ECH