Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01972 GTGAGAAGAGAGAAGATAAGTGAAAGGATGAAGGTGTTGCAAAGGCTTGTGCCAGGCTGTGATAAGGTGACTGGAAAGGCCCTTATGTTGGATGAAATAATCAATTATGTTCAGTCTTTACAGAATCAAGTTGAGTTCTTGTCAATGAAGCTTGCTTCCGTGAATCCAATGTTTTATGACTTGTCAACGGACCTAGATACCCTCTTGGTTAGACCAGAGAAACTAAATAGCATGGCATCACCATCACCATTACCATGTGTGTCACATTGCAACAGCCCCAACCAAGTCACAACTTTTGCTGATACAACCACCATGACCCCAACCAACATCTTCCACACTGCCAGTGACTACCTTTTGGATAATTCAGCTTCATTTTTTTTTCAAGGCCAGAGGTCGAATATGTTCTCTGAGGAGGATACCGGTAGTCAATTCTGGGACGCAGAGGACCAGCGACAAAAGTTTCTTCATCCATATGGATTCAACAACAACTTTTGCTCCTTTCATTAA 507 0.4241 VRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPMFYDLSTDLDTLLVRPEKLNSMASPSPLPCVSHCNSPNQVTTFADTTTMTPTNIFHTASDYLLDNSASFFFQGQRSNMFSEEDTGSQFWDAEDQRQKFLHPYGFNNNFCSFH 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01972 168 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 40 IPR011598 GO:0046983
Spst9g01972 168 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 2 57 IPR036638 GO:0046983
Spst9g01972 168 SMART finulus 1 46 IPR011598 GO:0046983
Spst9g01972 168 Gene3D - 1 60 IPR036638 GO:0046983
Spst9g01972 168 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 97 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01972 Spst-Chr9 33161399 33162465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01972 1 81 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 71.605 2.70e-35 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01972 - - gmx:100806696 312.768