Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01949 ATGGACCCATCCCATTGCCGCCACCGCCACCGCCACCGCCACCGGCGCCGGACCTGGTGCTGCTCCTTCGCCGTCCCTCCCTCCAGCCCCGACAACCTCACCGCCTCCAAACCTCTTCCCCCTCGCAAGCCCGAACCCAACTCCAAATCCACATTCTCGCTCCCGACCTCCCCCAAATCCCGTATCCCCTCTCGGATCGACCCTCGCAGGATACTCTCTCCGGGCAGAGTTTCCCCCATCGACTCCGATCCCGTCGCTGCCACCTCCGCTCCCTCCCCTTCGCCGGAGCTTCCGAGGCCGCAATCTCCGGCGCCGGTGACCGGTGACAGGGACGTGCGGATGAGCCTGAGAGGGAAGAACGGCGGGTGTATGGTTCTGGAGGTGAACTCCGGGGTTCTGTGCGCGAATTCCCAAGTGTTCGCGGGGTTGATAGAGGATTACAAGAAAGGTATTGCGTCTTCGAGTGGGAGTAACAAAATGTGTAGAATAGAGGTTCCTGAGGTTGAGAACTTGGGCGTGTTCAGAGAGACAATTGAGCTCATGTTTGAGAAAGACGATTGCCTCACCAAACGACTTCTCAACATTGGCGTTTTTCGATGCATTGATGTTTTGGAGGTTTCAGCAGGCATCATGTTCACCAAGGGTGTTTTAATGTGTTTACAATATCTTGAAGCTGTGCCTTGGACTGAAGAAGAAGAAGAAAAGTTGAGAAGTCTATTCACAAGGTTAAAGTTTGATGAAGCAACAACAAGAGACATCCTAGGAAGGCTTTACTTGCACGACTCAGTGGATTCTTCTTCCCAGCCAAATGTAGCTCGACAGCTTTTATGGTCTATCACCACTTGTGTGGACGCCAATGCAAGAAATGAACTAAAACCACTGGTGAAGGGTCTTCTTTGCAAAAGCTCCGTGTATGAGAAAAATCAACTCGACCTCAACAAAGAGGATCTATATTCTGTTTGCCGCGCATGTTTGGACTCACTGGAAAGCCTCTTCGAGGAGGCATCGGATACCATCCCTCCTGAAAGCTTAACAAAGAAAGATAAAAATAAGCCACTAATTGAACGCATCTCAAGGCAGGTTGATAACATCAATTGGCTGCTGGAAATCATGCTTGATGGGCAAATAGCAGAGGACTTTGTGAACATATGGGCAGATCAGCACCAACTTGTTAAAATGCATGATAGTGCATCCCCAATGATTAGATATGAACTAAGTCGTGTGTCAGCAACTCTCTTTATTGCCATGGTTACTAGAAAATTGCAATGCCGGTTGGAGGCACGATCAGGGCTTCTTCAGGCATGGTTCCAGCCTATGTTGATGGACTTTGGTTGGCTTCAGAGATGCAGAAGAGGGCTTGATATAAAGGTTTTGCAGGAGGCTATGGGTCAGACACTTCTAACTCTACCTTTAAATCAACAGTACATACTCTTCATGGAATGGTTTCGACACTTCTCAAGTCATGGCACTGAATGTCCAAATCTAAGCAAGGCATTTCAAATTTGGTGGCGCAGGTCATTCTTAAGAGGCTCTGAAACTCATGCCATTGAGTCAAGGTAA 1560 0.4917 MDPSHCRHRHRHRHRRRTWCCSFAVPPSSPDNLTASKPLPPRKPEPNSKSTFSLPTSPKSRIPSRIDPRRILSPGRVSPIDSDPVAATSAPSPSPELPRPQSPAPVTGDRDVRMSLRGKNGGCMVLEVNSGVLCANSQVFAGLIEDYKKGIASSSGSNKMCRIEVPEVENLGVFRETIELMFEKDDCLTKRLLNIGVFRCIDVLEVSAGIMFTKGVLMCLQYLEAVPWTEEEEEKLRSLFTRLKFDEATTRDILGRLYLHDSVDSSSQPNVARQLLWSITTCVDANARNELKPLVKGLLCKSSVYEKNQLDLNKEDLYSVCRACLDSLESLFEEASDTIPPESLTKKDKNKPLIERISRQVDNINWLLEIMLDGQIAEDFVNIWADQHQLVKMHDSASPMIRYELSRVSATLFIAMVTRKLQCRLEARSGLLQAWFQPMLMDFGWLQRCRRGLDIKVLQEAMGQTLLTLPLNQQYILFMEWFRHFSSHGTECPNLSKAFQIWWRRSFLRGSETHAIESR 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01949 519 MobiDBLite consensus disorder prediction 46 60 - -
Spst9g01949 519 MobiDBLite consensus disorder prediction 22 112 - -
Spst9g01949 519 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 109 510 IPR038920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01949 Spst-Chr9 28687233 28689461 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01949 - - gmx:100777771 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01949 9 28687233 28689461 Spst9g01949 9 28687233 28689461 ECH
Spst3g01308 3 16505774 16508007 Spst9g01949 9 28687233 28689461 PCT
Spst3g01075 3 14138347 14140604 Spst9g01949 9 28687233 28689461 PCT